FC921312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACAH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.865e-29 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 4.865e-29 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACAC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.865e-29 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 4.865e-29 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.865e-29 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 4.865e-29 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_ACIBL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=ispF PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLIL 592 RVG GFD H G PL IGG+ +PH G HSDGDVLLH + DA+LGA+ DIG FP SDPKWKGA S VFI+EA+R ++ AGY +GN+D +L+L Sbjct: 3 RVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAFFPPSDPKWKGANSVVFIEEAMRHIETAGYRVGNVDCSLVL 101
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.334e-29 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGG+ +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 6.334e-29 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.247e-29 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 8.247e-29 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 287 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 +PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+ +D AG+++ N+DAT+ Q Sbjct: 3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQ 105
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_GEOMG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispF PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.822e-28 Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHG+D+H L G LI+GG++VP+ERG HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L + GY +GN+DAT++ Q Sbjct: 2 RIGHGYDVHCLVEGRKLILGGVDVPYERGLLGHSDADVLLHAIADAILGALALGDIGKHFPDTDPQFKGADSRKLLRHVMALAGQKGYVLGNVDATIVAQ 101 HSP 2 Score: 26.9498 bits (58), Expect = 1.822e-28 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELLGADPXRCN 675 + RPKL+P+ +R NL+E L A+ R N Sbjct: 100 AQRPKLAPFIPEMRANLAEDLIAEIDRIN 128
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_PELCD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.367e-28 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHG+D+H+L LI+GG+++PH G HSD DVLLH + DAILGALG DIG+ FPD+DP +KG S + E +RL + GY +GNLDAT+I Q Sbjct: 3 RIGHGYDVHQLVAERKLILGGVDIPHTLGLLGHSDADVLLHAICDAILGALGEGDIGKHFPDTDPAYKGISSIKLLHEVMRLAETKGYRLGNLDATIIAQ 102 HSP 2 Score: 29.261 bits (64), Expect = 2.367e-28 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELLGADPXRCN 675 + RPKL+P+ +R N++E G D R N Sbjct: 101 AQRPKLAPFIGNMRENIAEACGTDVSRIN 129
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACCN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispF PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.370e-28 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H G PLIIGGI +P+E+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQ 102 HSP 2 Score: 27.7202 bits (60), Expect = 2.370e-28 Identity = 11/27 (40.74%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELL 651 L C + +PK++P+ E++R +SELL Sbjct: 95 LDCTIIAQKPKMAPHIESMRKRISELL 121 The following BLAST results are available for this feature:
BLAST of FC921312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921312 ID=FC921312; Name=FC921312; organism=Citrus clementina; type=EST; length=675bpback to top |