FC921312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_PORGI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis GN=ispF PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.491e-27 Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 2 Query: 290 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATL 586 PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG FP SDP++KG S + + + L+ GYE+GN+DAT+ Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARVMELVRSQGYELGNIDATI 102
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPDF_DINSH (Bifunctional enzyme ispD/ispF OS=Dinoroseobacter shibae (strain DFL 12) GN=ispDF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.220e-27 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 287 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 + R G+G+D+HR G +I+ G+ VPH+R HSD DV +H V DAI GALG DIGQ FP SDP+WKGA S +F++ AV L E GY I ++D TL+ + Sbjct: 242 MDIRTGNGYDVHRFGTGDAVILCGVEVPHDRALMGHSDADVGMHAVTDAIYGALGDGDIGQHFPPSDPQWKGAASEIFLRHAVALAAERGYTITHMDCTLVCE 344 HSP 2 Score: 30.0314 bits (66), Expect = 4.220e-27 Identity = 11/31 (35.48%), Postives = 17/31 (54.84%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELLGADP 663 + C RPK+ PY ++ +SEL+G P Sbjct: 337 MDCTLVCERPKIGPYHAVMKAKMSELMGLQP 367
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SALRD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salinibacter ruber (strain DSM 13855) GN=ispF PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.320e-27 Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+G G+D+HRL G PLI+GG+ VPH+RG HSD DVLLH V DA+LGA L D+G FPD+D KWK A S ++ V + AGY N+DAT++L+ Sbjct: 2 RIGFGYDVHRLVEGRPLILGGVQVPHDRGLAGHSDADVLLHAVADALLGAAALGDLGAHFPDTDAKWKDADSQALLRRVVERVQHAGYAPHNVDATVLLE 101 HSP 2 Score: 24.2534 bits (51), Expect = 4.320e-27 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 595 RPKLSPYKETIRTNLSELL 651 RPKL P+ + +RTN++ L Sbjct: 102 RPKLRPHVDEMRTNIARAL 120
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SERP5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Serratia proteamaculans (strain 568) GN=ispF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27 Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ PL+IGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S V ++EA + + GY +GNLD T+I Q Sbjct: 2 RIGHGFDVHKFGGEGPLVIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRVLLREAWKRIRAKGYRLGNLDITIIAQ 101
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SOLUE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Solibacter usitatus (strain Ellin6076) GN=ispF PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.619e-27 Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R G G+D+HR+ G +I+GG+ VP E G E HSD DVL H + DAILGA L DIG FPDSDP+WKG S VF++ A L + GY I N+D+T+IL+ Sbjct: 5 RTGLGWDVHRIATGRKMILGGVTVPCEFGLEGHSDADVLAHAITDAILGAAALGDIGMHFPDSDPRWKGCDSLVFLRHARDLATQKGYRIVNVDSTIILE 104 HSP 2 Score: 26.9498 bits (58), Expect = 5.619e-27 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 595 RPKLSPYKETIRTNLSELLGADPXR 669 RPKL +++TIR L+E L D R Sbjct: 105 RPKLKDFRQTIRERLAETLELDVDR 129
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQ 104
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_SHESH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=ispF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+H+ G PL++GG+++P+E G AHSDGDV+LH + DA+LGA+ L DIG+ FPD+D ++KGA S ++ RL E GY +GNLD T+I Q Sbjct: 4 RIGHGFDVHKFGGGSPLLLGGVHIPYETGLIAHSDGDVVLHAISDAVLGAVALGDIGKHFPDTDEEFKGADSRHLLRHCYRLAKEKGYSMGNLDVTIIAQ 103
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_EDWI9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=ispF PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 R+GHGFD+HR PLIIGG+ + H +G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GNLD TLI Q Sbjct: 2 RIGHGFDVHRFGGEGPLIIGGVRIAHPQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAYKGADSRALLREAYRSIRARGYRLGNLDITLIAQ 101
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.315e-27 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 293 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQ 595 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S ++ ++ + GY +GN+D T+I Q Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQ 102 HSP 2 Score: 26.9498 bits (58), Expect = 7.315e-27 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 1 Query: 571 LGCHADSSRPKLSPYKETIRTNLSELLGADPXRCN 675 + C + +PK+ PY E +R ++E L AD + N Sbjct: 95 IDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVN 129
BLAST of FC921312 vs. ExPASy Swiss-Prot
Match: ISPF_ALKMQ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.315e-27 Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 296 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQD 598 RVG G+D+HRL G LI+GG+ +PHE+G HSD DVLLH + DA+LGA+ L DIG+ FPD+D K+KG S + E R++ E Y N+DAT+I Q+ Sbjct: 2 RVGIGYDVHRLVEGRKLIVGGVEIPHEKGLLGHSDADVLLHAIKDALLGAVALGDIGKHFPDTDEKYKGESSLYLLNEVGRMLAEKAYVANNIDATIIAQE 102 HSP 2 Score: 28.4906 bits (62), Expect = 7.315e-27 Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 589 SSRPKLSPYKETIRTNLSELLGADPXRCN 675 + PK++PY E +R N++E+LG + N Sbjct: 100 AQEPKMAPYIELMRRNIAEVLGIKVEQVN 128 The following BLAST results are available for this feature:
BLAST of FC921312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921312 ID=FC921312; Name=FC921312; organism=Citrus clementina; type=EST; length=675bpback to top |