FC921313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_FLAPJ (Uroporphyrinogen decarboxylase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=hemE PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 67/172 (38.95%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 162 VAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + + LKA++GE V+RPPVW+MRQAGRY+ + + +KY F R + +L EI++QP PD ILFSDIL M I + + GP + +PI T +V++V D +++ YV A+ + ++ +N+E ++GF G+P+T++ Y VEG SK F + K FS P Sbjct: 2 IKNDLFLKALKGETVQRPPVWMMRQAGRYLPEFIALRDKYDFFT-RCQTPELAAEITVQPIRRIAPDAAILFSDILVVPQAMGIEVLMKENVGPFLPNPIRTIQDVERVIVPDVHQTLGYVFDAIKLTKQMLNDEVPLIGFAGSPWTIMCYAVEGQGSKSFDKAKGFCFSHP 172
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANCP (Uroporphyrinogen decarboxylase OS=Xanthomonas campestris pv. campestris GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+R + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPLERFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDADAIHRLGVPDMETELRYVMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANCB (Uroporphyrinogen decarboxylase OS=Xanthomonas campestris pv. campestris (strain B100) GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+R + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPLERFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDADAIHRLGVPDMETELRYVMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANC8 (Uroporphyrinogen decarboxylase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+R + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPLERFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDADAIHRLGVPDMETELRYVMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_STRAW (Uroporphyrinogen decarboxylase OS=Streptomyces avermitilis GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 76/170 (44.71%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 168 EPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 E LKA R E V PVW MRQAGR + Y + E P E +LV EI+LQP D I FSDI+ PL + I DI G GPV+ PI T A++ Q+R+ PE+ V YV +A+ +L E+ E ++GF GAPFTL SY+VEGG SK+ K L + P Sbjct: 17 ESAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIPML-ESCMRPELVAEITLQPVRRHNVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVVEKPIRTRADLAQLRDLTPED-VSYVTEAIKLLTAEL-GETPLIGFAGAPFTLASYLVEGGPSKNHEHTKALMYGDP 183
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SHEON (Uroporphyrinogen decarboxylase OS=Shewanella oneidensis GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/166 (39.16%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + F +N +L E++LQP ++ D ILFSDILT M + G+GP P +T + ++ DPE+ + YV KA++ +R E+N + ++GF G+P+TL +Y+VEGGSSK F +IK++A+++P Sbjct: 10 LRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SHEDO (Uroporphyrinogen decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/166 (39.16%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + F N +L E++LQP +K D ILFSDILT M + +G+GP P +T + ++ DPE+ + YV +A++ +R E+ E ++GF G+P+TL +Y+VEGGSSK F +IK++A+++P Sbjct: 10 LRALLKQPVDATPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPLRRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_KLEP7 (Uroporphyrinogen decarboxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + F +N +L E++LQP + D ILFSDILT M + G+GP P+ + A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TL +Y+VEGGSSK F IK++ +++P Sbjct: 10 LRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPEQELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_ACIBL (Uroporphyrinogen decarboxylase OS=Acidobacteria bacterium (strain Ellin345) GN=hemE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 64/168 (38.10%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 174 MLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + ++A + + VER PVW MRQAGRYM Y+ + EKY S E + D+ E+++ D I+F+D+L PL M +PF G+GPVI PI A + ++R D + YV +A+ + + ++ V+GF GAPFTL SY++EGG S+++ ++K+L ++ P Sbjct: 7 LFVRACKRQPVERTPVWFMRQAGRYMSEYRAVREKY-SLVEICKKPDVAAEVTITAAEALNVDAAIIFADLLLPLEVMGLPFHFSPGEGPVIEVPIRDAAHITRLRT-DRAHDLGYVAEAVKKVSDHFGSKLPVIGFCGAPFTLASYMIEGGGSRNYLEVKKLMYNSP 172
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_IDILO (Uroporphyrinogen decarboxylase OS=Idiomarina loihiensis GN=hemE PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29 Identity = 64/166 (38.55%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+R PVW+MRQAGRY+ Y+ + + F N +L E+++QP F D ILFSDILT M + G+GP DP+ + A + + D E+ + YV A+ +R E+N ++GF G+P+TL +Y+VEGGS+K+F ++K+L F+ P Sbjct: 12 LRALAKQPVDRTPVWMMRQAGRYLPEYKEVRGQAGDFMSLCRNTELACEVTMQPLRRFDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKDPVRSMAAIKNLAVPDMEDELGYVMDAVRAIRRELNGSVPLIGFSGSPWTLATYMVEGGSTKNFSKVKQLMFADP 177 The following BLAST results are available for this feature:
BLAST of FC921313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921313 ID=FC921313; Name=FC921313; organism=Citrus clementina; type=EST; length=678bpback to top |