FC921313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNE7 (Uroporphyrinogen decarboxylase OS=Synechococcus elongatus (strain PCC 7942) GN=hemE PE=3 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 106/169 (62.72%), Postives = 130/169 (76.92%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P LL+A RGE ++RPPVW+MRQAGRYMK Y+ + +KYP FRERSE +L +EISLQP+ FKPDGVILFSDILTPL GM IPFDII+ KGP++ PI T +V V + DPEE+ P++ L LR+EV NEAAVLGF GAP+TL +Y +EG SSK + IK LAFS+P Sbjct: 8 PRLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQPFRAFKPDGVILFSDILTPLPGMGIPFDIIESKGPILEPPIRTAEQVAAVHDLDPEEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEP 176
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROMA (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus GN=hemE PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57 Identity = 109/169 (64.50%), Postives = 133/169 (78.70%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE V RPPVW+MRQAGRYMK Y+ + + +PSFRERSEN DL EIS+QP+ FKPDGVILFSDILTPL GM I FDI++ KGP+I DPI T +V +R +P+ S+P+VG+ L LRE V NEAAVLGFVGAP+TL +YVVEG SSK++ IK +AF QP Sbjct: 6 PLLLRAARGESVNRPPVWMMRQAGRYMKVYRELRDNHPSFRERSENPDLSYEISMQPFREFKPDGVILFSDILTPLPGMGIDFDIVESKGPLINDPIRTLEQVKTLRPLEPQVSLPFVGEVLGRLRESVKNEAAVLGFVGAPWTLAAYVVEGKSSKNYSVIKAMAFQQP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNS9 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9902) GN=hemE PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.266e-57 Identity = 109/169 (64.50%), Postives = 134/169 (79.29%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP+ F+PDGVILFSDILTPL GM I FDII+ KGP I DPI + +V +R +P ES+P+VG+ L LR+ V N+AAVLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 6 PLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPLNPAESMPFVGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNR3 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain RCC307) GN=hemE PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.571e-57 Identity = 110/174 (63.22%), Postives = 135/174 (77.59%), Query Frame = 3 Query: 156 VSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 +S A P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP++ F+PDGVILFSDILTPL GM I FDII+ KGP I DPI A+V+ +R P E++P+VG+ L LR V N A VLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 1 MSDALPLLLRAARGEQVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPYNAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQINDPIRNLAQVEALRPLVPAETMPFVGEVLGRLRSSVGNNATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROM2 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemE PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.241e-56 Identity = 104/169 (61.54%), Postives = 135/169 (79.88%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL A G+ V RPPVW+MRQAGRYMK Y+ + E+YPSFRERSEN +L EIS+QP+H FKPDGVILFSDILTPL GM I F+II+ KGP+I DPI +++ ++E +P ES+ +VG+ L+ L+++VNNEA VLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 6 PLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISMQPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKELNPSESLSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROMT (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL2A) GN=hemE PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.717e-56 Identity = 106/169 (62.72%), Postives = 134/169 (79.29%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE+VERPPVW+MRQAGRYMK Y+ + + +PSFRERSEN DL EIS+QP+ F+PDGVILFSDILTPL GM I FDI++ KGP+I DPI + +V ++ PEES+ +VG+ L LRE V N+AAVLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 6 PLLLRAARGENVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISMQPFKAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROM1 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL1A) GN=hemE PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55 Identity = 106/169 (62.72%), Postives = 133/169 (78.70%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + + +PSFRERSEN DL EIS+QP+ F+PDGVILFSDILTPL GM I FDI++ KGP+I DPI + +V ++ PEES+ +VG+ L LRE V N+AAVLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 6 PLLLRAARGEHVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISMQPFTAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROMM (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemE PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.372e-55 Identity = 103/174 (59.20%), Postives = 138/174 (79.31%), Query Frame = 3 Query: 156 VSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 +S ++P+LL+A RGE VER PVW+MRQAGRYMK Y+ + ++YPSFRERSEN DL +IS+QP+ F+PDGVILFSDILTPL GM I FDI++ KGP+I PI + ++++ ++ +P ++P+VG+ L LRE V N+AAVLGFVGAP+TL +YVVEG SSK++ IK +AF QP Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PROM3 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemE PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.792e-55 Identity = 103/174 (59.20%), Postives = 137/174 (78.74%), Query Frame = 3 Query: 156 VSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 +S ++P+LL+A RGE VER PVW+MRQAGRYMK Y+ + ++YPSFRERSEN DL +IS+QP+ F+PDGVILFSDILTPL GM I FDI++ KGP+I PI + ++++ ++ +P ++P+VG+ L LRE V N AAVLGFVGAP+TL +YVVEG SSK++ IK +AF QP Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNRAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_ANASP (Uroporphyrinogen decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=hemE PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55 Identity = 100/174 (57.47%), Postives = 133/174 (76.44%), Query Frame = 3 Query: 156 VSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 V+ P LL+A RGE V+RPPVW+MRQAGRYMK+Y+ + EKYPSFR+RSE ++ +E+SLQPW F+PDGVILFSDI+TPL G+ I DI +GKGP+I PI T A+++Q+R +PE ++P++ L LR+EV N++ VLGFVGAP+TL +Y VEG SK + IK +AFS P Sbjct: 3 VTSTAPHLLRAARGEIVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDP 176 The following BLAST results are available for this feature:
BLAST of FC921313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921313 ID=FC921313; Name=FC921313; organism=Citrus clementina; type=EST; length=678bpback to top |