FC921313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_MANSM (Uroporphyrinogen decarboxylase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemE PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LKA+ E V+ PVW+MRQAGRY+ Y+ + F N DL E++LQP ++ D ILFSDILT M + G+GP PI T + V+ + DPE+ + YV A+ +R E+N E ++GF G+P+TL +Y+VEGGS+K F +IK++ +++P Sbjct: 10 LKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTIPDAMGLGLTFGAGEGPKFDRPIETKSAVENLPIPDPEQELQYVMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSTKAFTKIKKMMYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_GEOUR (Uroporphyrinogen decarboxylase OS=Geobacter uraniireducens (strain Rf4) GN=hemE PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 73/166 (43.98%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L A G+ V+R PVWLMRQAGRY+ Y + K +F E + +L E+S+QP + D ILFSDILTP+ M + D + G PV PI T A+V+++R E+ VPYV + + ILR E+ N+ ++GF GAPFTL Y+VEG SK + +KR+ ++ P Sbjct: 6 LDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVSIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAP 168
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSF (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain FRC-32) GN=hemE PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 73/166 (43.98%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L A G+ V+R PVWLMRQAGRY+ Y + K +F E + +L E+++QP + D ILFSDILTP+ M + D + G PV PI T A+V+++R E+ VPYV + + ILR E+ N+ ++GF GAPFTL Y+VEG SK + IKR+ ++ P Sbjct: 6 LDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVTIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAP 168
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_DEIRA (Uroporphyrinogen decarboxylase OS=Deinococcus radiodurans GN=hemE PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEA-AVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LK RGE PVW MRQAGRYM Y+ + + E DL EI+LQP D ILF+DILTPL M + D + G GPVI +PINT +VD + E++PY +++ +L E+N+ ++GFVGAPFTL SY +EG S+++ + KR +++P Sbjct: 7 LKTARGEQAPYTPVWFMRQAGRYMPEYRAL-RAGKTMLECIRTPDLAAEITLQPIKAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVLGVPATAETMPYTAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEP 172
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XYLFM (Uroporphyrinogen decarboxylase OS=Xylella fastidiosa (strain M12) GN=hemE PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31 Identity = 68/167 (40.72%), Postives = 103/167 (61.68%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+R + V+R P+WLMRQAGRY+ Y+ + SF + ++ +L EI+LQP F D ILFSDIL M + I+G+GP + PI A + Q+ D E + YV A+ ++R+E++N ++GF G+P+TL Y++EGG SK + IK +AF+ P Sbjct: 7 LLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPLRRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYVMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGGSKEYAHIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_VIBPA (Uroporphyrinogen decarboxylase OS=Vibrio parahaemolyticus GN=hemE PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31 Identity = 67/166 (40.36%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ E V+ PVW+MRQAGRY+ Y+ + F +N +L E++LQP F D ILFSDILT M + G+GPV +PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TL +Y+VEGGSSK F +IK++ +++P Sbjct: 10 LRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SERP5 (Uroporphyrinogen decarboxylase OS=Serratia proteamaculans (strain 568) GN=hemE PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31 Identity = 67/166 (40.36%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + F +N +L E++LQP F D ILFSDILT M + G+GP PI + A+VD++ FDPE + YV A+ +R E+ E ++GF G+P+TL +Y+VEGGSSK F ++K++ +++P Sbjct: 10 LRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_METCA (Uroporphyrinogen decarboxylase OS=Methylococcus capsulatus GN=hemE PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31 Identity = 63/166 (37.95%), Postives = 107/166 (64.46%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 ++A+ + VER PVW+MRQAGRY+ Y+ + E+ SF + +L E++LQP ++ D ILFSDILT M + + ++G+GP +PI A++ ++ DPE + YV A+ ++++ + + A ++GF G+P+TL +Y+VEGGSS+ F ++K L + +P Sbjct: 6 IRALLRQPVERTPVWMMRQAGRYLPEYREVRERAGSFMNLCTSPELACEVTLQPLERYRLDAAILFSDILTVPDAMGLGLEFVEGEGPRFRNPIRGAADIHRLGVPDPEAELAYVPAAVRLIKQRLGDRAPLIGFSGSPWTLATYMVEGGSSREFRKVKCLMYEEP 171
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_VIBHB (Uroporphyrinogen decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemE PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.251e-31 Identity = 67/166 (40.36%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ E V+ PVW+MRQAGRY+ Y+ + F +N +L E++LQP F D ILFSDILT M + G+GPV PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TL +Y+VEGGSSK F +IK++ +++P Sbjct: 10 LRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_COLP3 (Uroporphyrinogen decarboxylase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hemE PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.251e-31 Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + + F +N +L E+++QP F D ILFSDILT M + G+GP PI A+VD++ DPE+ + YV A+ +R+E+ E ++GF G+P+TL +Y++EGGSSK F +IK++ F++P Sbjct: 10 LRALLKQPVDYTPVWMMRQAGRYLPEYREVRKNAGDFMSVCKNAELACEVTIQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIAVPDPEDELGYVMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEP 175 The following BLAST results are available for this feature:
BLAST of FC921313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921313 ID=FC921313; Name=FC921313; organism=Citrus clementina; type=EST; length=678bpback to top |