FC921313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PELCD (Uroporphyrinogen decarboxylase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hemE PE=3 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + A G V R PVWLMRQAGRY+ Y+ I E+ F E + +L E++LQP D ILFSDIL P+ M ++ PV+ P+ T A+V+ +R PE+ VP+V + + +LR E++ ++GF GAPFTL Y+VEG S+HF +KRL + P Sbjct: 9 INACYGRPVTRTPVWLMRQAGRYLPQYRKIRERV-KFLELCKTPELAAEVTLQPVDALGVDAAILFSDILIPIEAMGQ--NLFYRPAPVLEPPVRTAADVEALRVLQPEQDVPFVLETIRLLRRELDGRVPLIGFGGAPFTLACYMVEGAGSRHFLALKRLMYQAP 171
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_MYXXD (Uroporphyrinogen decarboxylase OS=Myxococcus xanthus (strain DK 1622) GN=hemE PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 70/167 (41.92%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A R + + PVWLMRQAGRY+ Y+ I +F + ++ DL E+++QP D I+FSDIL P+ M I ++ KGP DP+ + A++D++ DP E +V +A+ R+ +N+ V+GF GAPFTL +Y+VEGG SK + IKRL F QP Sbjct: 5 LLRAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNI-AFLDLCKHPDLAAEVTVQPVTRLGVDAAIIFSDILIPVEAMGITLEL-GDKGPHFPDPVRSAADIDKLGVPDPVEGTGFVAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQP 169
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_LISMH (Uroporphyrinogen decarboxylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=hemE PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 162 VAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + + LKA R E V+R PVW MRQAGR Y+ + EKY F E + ++ ++ P + D IL+ DI+TPL GM + +I G GPVI +PI T +V+++ F PE VPYV + +L +++ + ++GF GAPFTL SY++EGG SK++ Q K + +P Sbjct: 4 ITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIEVPYVLDTIKLLADDM-LDVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_LISIN (Uroporphyrinogen decarboxylase OS=Listeria innocua GN=hemE PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 162 VAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + + LKA R E V+R PVW MRQAGR Y+ + EKY F E + ++ ++ P + D IL+ DI+TPL GM + +I G GPVI +PI T +V+++ F PE VPYV + +L +++ + ++GF GAPFTL SY++EGG SK++ Q K + +P Sbjct: 4 ITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIEVPYVLDTIKLLADDM-LDVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_FLAJ1 (Uroporphyrinogen decarboxylase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=hemE PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 174 MLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 + LKA++GE V+RPPVW+MRQAGRY+ + + +KY F R + +L EI++QP PD ILFSDIL M I + + GP I +PI + A+V +V D +ES+ YV A+ + +E +N+E ++GF G+P+T+ Y VEG SK F K FS P Sbjct: 6 LFLKALKGETVQRPPVWMMRQAGRYLPEFIELRDKYDFFT-RCQTPELAAEITVQPIRRIAPDAAILFSDILVVPQAMGIEVLMKENIGPFIPNPIRSMADVQRVYVPDIQESLGYVMDAIKLTKEMLNDEVPLIGFAGSPWTIFCYAVEGRGSKSFDMAKGFCFSNP 172
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANOR (Uroporphyrinogen decarboxylase OS=Xanthomonas oryzae pv. oryzae GN=hemE PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+ + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ A + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANOP (Uroporphyrinogen decarboxylase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hemE PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+ + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ A + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_XANOM (Uroporphyrinogen decarboxylase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hemE PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 177 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 LL+A+ + V+R PVWLMRQAGRY+ Y+ + SF ++N D+ E++LQP F D ILFSDILT M + ++G+GP P+ A + ++ D E + YV A+ ++R E++ ++GF G+P+TL Y++EGG SK + +IK +AF+ P Sbjct: 7 LLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAP 173
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_PSEHT (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemE PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 65/166 (39.16%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 180 LKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 L+A+ + V+ PVW+MRQAGRY+ Y+ + F N +L E++LQP + D ILFSDILT M + G+GP PI++ ++V ++ + DP + + YV A++ +R E+ E ++GF G+P+TL +Y+VEGGSSK F +IK++AF++P Sbjct: 10 LRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPNDDLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEP 175
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_CYTH3 (Uroporphyrinogen decarboxylase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hemE PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 3 Query: 174 MLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 ++L+A RGE VER PVWLMRQAGR + Y+ + EK F E L E+++QP + D I+FSDIL M +P+++ + KGP I + A++D + D + + YV A+ + +E+N ++GF GAPFT+++Y++EG SK F + +R +++P Sbjct: 7 LILRAARGEAVERTPVWLMRQAGRILPEYRAVREKLSGFIELCTTPALAAEVTIQPVDILGVDAAIIFSDILVIPEAMGLPYEMQESKGPFFPKVITSAADIDALLATDAADHLTYVYDAIELAVKELNGRVPLIGFAGAPFTILAYMIEGQGSKTFSKARRFLYTEP 174 The following BLAST results are available for this feature:
BLAST of FC921313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921313 ID=FC921313; Name=FC921313; organism=Citrus clementina; type=EST; length=678bpback to top |