FC921317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 48/149 (32.21%), Postives = 69/149 (46.31%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 694 LT E+Q VR V++ +KEIAP + EFP K+G L + G + YG G A+A+ E+ + S SL + G+EEQKQ +L LA + + LTEP GSDA T A +++ G+ Sbjct: 5 LTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGE 153
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 266 QAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQSA 700 Q +R R+ EKE+ PI + ++ FP + K+G L + + + G IA+ EI+R AS + V++ L + I GS+EQKQ+++ + + C+AL+EP GSDA A TTA W+L G A Sbjct: 39 QMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKA 184
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDSB_PONAB (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 56/186 (30.11%), Postives = 85/186 (45.70%), Query Frame = 2 Query: 182 FPQATPASKFPPCASDYYQFDDLL---------------TSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 691 FP + K PP S Q + LL T EE ++ V++ +++IAP++ E ++ VI L + G + YG G S + I E+A+VDAS + F + ++L I G+EEQK YLP L + + L+E GSD+ AL T A K ++L G Sbjct: 19 FPTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKGTYLPQLT-TEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNG 203
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACAD8_HUMAN (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 51/150 (34.00%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 257 SEEQAVRMKVR-ECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQSA 700 +EEQ KV + +E+AP M E+ +K FP V+ K L G I+ G G S ++ +A S + +I +H+ A + I G+EEQ+ K+ P L + A + LTEP GSDA++L T+A K +IL G A Sbjct: 42 NEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWM-IDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKA 190
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDSB_HUMAN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 47/147 (31.97%), Postives = 74/147 (50.34%), Query Frame = 2 Query: 254 TSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 691 T EE ++ V++ +++IAP++ E ++ VI L + G + YG G S + I E+A+VDAS + F + ++L I G+EEQK YLP L + + L+E GSD+ AL T A K ++L G Sbjct: 58 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLT-TEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNG 203
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACAD8_MOUSE (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acad8 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQSA 700 L E++ + + +E+AP M E+ +K FP V+ K L G ++ G G S ++ +A S + +I +H+ A + I G+EEQ+ K+ P L + A + LTEP GSDA++L T+A + +IL G A Sbjct: 39 LNEEQKGFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWM-IDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKQQGDHYILNGSKA 188
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 254 TSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHV--IPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WILEGQ 694 T E + + + +E+++ P ++ E +F V + K G L + G + + YG G +A+ + +R S S H + L I GSEEQK+KYLP LA IA +ALTEP GSDA TTA E G ++L G+ Sbjct: 31 TDEHKMIAKTTEDYIEQDVLP-HIDDIENHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGE 180
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACAD9_MOUSE (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 335 EKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVE 670 ++ + P + KL +L + G + + YG G S T A + EI +DAS + + H ++ + I L G++EQK KYLP L+ IA + LTEPA GSDA+++ T AT E Sbjct: 93 QEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQAIGLKGIILVGNDEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSE 204
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACADM_MOUSE (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadm PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 42/149 (28.19%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 694 LT +++ + R+ +EI P+ EY + E+PF +I + L + I + G G A + E+A T I +S L + + L G+++QK+KYL + + + + +TEP+ GSD +A+ T A K +++ GQ Sbjct: 41 LTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCGGLGLGTFDACLITEELAYGCTGVQTAIEANS-LGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQ 188 The following BLAST results are available for this feature:
BLAST of FC921317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921317 ID=FC921317; Name=FC921317; organism=Citrus clementina; type=EST; length=704bpback to top |