FC921329

Overview
NameFC921329
Unique NameFC921329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig171 contig Ccv1_Contig171:44..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 3
Query:  207 DIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKK-LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYI 716
            DI+  T++ S+K IIG G   TVYK  L   K VA+K+L     Q  +EF  E+ET+G +KH NLVSL GY   S   LL Y++M NGSL   L   T   + LDW  RLKIA+GAA+GLA+LHH   P IIHRD+K+SNILLD DFE  + DFG+A+ +   +S+ ST I
Sbjct:  909 DIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVI 1079          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.744e-38
Identity = 76/169 (44.97%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  210 IMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRL-YSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKK-LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            ++  T+NL+EKY IG GA   VY+  L + K  A+KRL ++ + +  +    E++T+G ++HRNL+ L+G+ L     L+ Y +M  GSL+D+LHG + K+  LDW  R  +ALG A GLAYLH+DC P I+HRD+K  NIL+D D E H+ DFG+A+ L  S   T+T
Sbjct:  820 VLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTAT 988          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.858e-37
Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 3
Query:  120 PDGSLDKPVNYSTPKLVILHMNMALHVYE----DIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILH-GPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            P GS DK ++     LV+L  N    V +    ++++ T+N S+  IIG G    VYK  L N   +A+K+L   Y    KEF+ E+E +   KH NLV+LQGY +  S  +L Y FMENGSL   LH  P    +LDW  RL I  GA+ GLAY+H  C P I+HRD+KSSNILLD +F+A++ DFG+++ +   +++ +T
Sbjct:  768 PPGS-DKDIS-----LVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTT 963          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.858e-37
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPT---KKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTS 707
            +  ++  T   S   +IG+G    V+K  LK+   VAIK+L     Q  +EF  E+ET+G IKHRNLV L GY       LL Y+FM+ GSL ++LHGP    K++ L W+ R KIA GAA+GL +LHH+C P IIHRD+KSSN+LLD+D EA ++DFG+A+ +    ++ S
Sbjct:  828 FSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLS 999          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.427e-37
Identity = 84/170 (49.41%), Postives = 106/170 (62.35%), Query Frame = 3
Query:  204 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTK-KKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            E++++ T N S+  IIG G    VYK    +    A+KRL     Q  +EF+ E+E +   +H+NLVSLQGY    +  LL Y FMENGSL   LH        L WD RLKIA GAA+GLAYLH  C P +IHRDVKSSNILLD+ FEAHL DFG+A+ L    ++ +T
Sbjct:  745 EELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTT 914          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37
Identity = 75/169 (44.38%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  210 IMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRL-YSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILH-GPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            ++  T+NL +KYIIG GA   VY+  L + +  A+K+L ++ + +  +  + E+ET+G ++HRNL+ L+ + +     L+ Y +M NGSL D+LH G   +  LDW  R  IALG + GLAYLHHDC P IIHRD+K  NIL+D D E H+ DFG+A+ L  S   T+T
Sbjct:  787 VLAATDNLDDKYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRANQNMKREIETIGLVRHRNLIRLERFWMRKEDGLMLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDDSTVSTAT 955          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37
Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  204 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYP-QCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL 683
            ED++   E L E+ IIG G +  VY+  + N   VAIKRL      +    F  E++T+G I+HR++V L GY  +   NLL Y++M NGSL ++LHG +K   L W+TR ++A+ AA+GL YLHHDCSP I+HRDVKS+NILLD DFEAH+ DFG+AK L
Sbjct:  686 EDVL---ECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHG-SKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFL 842          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37
Identity = 79/170 (46.47%), Postives = 109/170 (64.12%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKK-KLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTS 707
            + D++  T       ++G G    VYK  LK+   VAIK+L     Q  +EF  E+ET+G IKHRNLV L GY       LL Y++M+ GSL D+LH   K   KL+W  R KIA+GAA+GLA+LHH+C P IIHRD+KSSN+LLD++ EA ++DFG+A+ +    ++ S
Sbjct:  878 FADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLS 1047          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36
Identity = 85/188 (45.21%), Postives = 116/188 (61.70%), Query Frame = 3
Query:  162 KLVILHMNMALHV-YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILH----GPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            KLV+L  +    + Y+D++  T +  +  IIG G    VYK  L + K VAIK+L     Q  +EFE E+ET+   +H NLV L+G+    +  LL Y +MENGSL   LH    GP   K   W TRL+IA GAA+GL YLH  C P I+HRD+KSSNILLD++F +HL DFG+A+ +   +++ ST
Sbjct:  710 KLVVLFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLK---WKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVST 894          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36
Identity = 88/204 (43.14%), Postives = 116/204 (56.86%), Query Frame = 3
Query:  102 HNPTHFPDGSLDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKK--LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTS 707
            H P      + +KP+     KL   H+          +  T   S   +IG G    VYK  L +   VAIK+L     Q  +EF  E+ET+G IKHRNLV L GY       LL Y++M+ GSL  +LH  TKK    LDW  R KIA+GAA+GLA+LHH C P IIHRD+KSSN+LLD+DF A ++DFG+A+ +    ++ S
Sbjct:  829 HEPLSINVATFEKPLR----KLTFAHL----------LEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLS 1018          
The following BLAST results are available for this feature:
BLAST of FC921329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
EXS_ARATH2.195e-3850.88Leucine-rich repeat receptor protein kinase EXS OS... [more]
PEPR1_ARATH3.744e-3844.97Leucine-rich repeat receptor-like protein kinase P... [more]
PSYR1_ARATH1.858e-3742.57Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRL2_ARATH1.858e-3746.51Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
PSKR2_ARATH2.427e-3749.41Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PEPR2_ARATH9.222e-3744.38Leucine-rich repeat receptor-like protein kinase P... [more]
CLV1_ARATH9.222e-3750.93Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
BRI1_SOLPE9.222e-3746.47Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
PSKR1_ARATH1.573e-3645.21Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BRL3_ARATH1.573e-3643.14Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC32103F12EF RVDevelopN Citrus clementina cDNA clone C32103F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921329 ID=FC921329; Name=FC921329; organism=Citrus clementina; type=EST; length=716bp
ATCCAACGGAACGAGTTACAATTTCTAAAGCAGCTATTCTCGGAATTGCT
CTCGGTGCACTTGTAATTCTTCTCATGATCCTGGTGGCAGCATGCCGACC
ACACAATCCTACTCATTTTCCAGATGGATCACTTGACAAACCAGTTAATT
ACTCCACTCCCAAGTTAGTGATCCTTCACATGAACATGGCACTTCATGTG
TATGAAGACATTATGAGGATGACCGAGAATTTGAGTGAGAAGTACATAAT
TGGTTATGGGGCATCGAGTACAGTGTACAAGTGTGTTCTTAAAAATTGTA
AGCCAGTGGCTATCAAGCGACTTTACTCTCACTATCCACAGTGCTTGAAG
GAATTTGAGACAGAGCTTGAGACGGTTGGGAGCATCAAGCACCGAAATCT
GGTCAGCCTCCAAGGATACTCGTTGTCCTCCTCAGGGAACCTTCTCTTCT
ATGATTTTATGGAAAATGGTAGTCTTTGGGATATTCTTCATGGTCCAACA
AAGAAGAAAAAGCTTGACTGGGACACTCGACTGAAAATAGCACTAGGAGC
TGCACAAGGGCTAGCGTATTTACACCATGATTGTAGTCCTCGAATCATCC
ACCGGGATGTGAAGTCCTCTAATATTCTATTGGACAAGGATTTTGAAGCC
CATCTCACAGATTTTGGAATTGCCAAAAGTTTATGTGTGTCCAAGTCGTA
TACATCTACTTACATC
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