FC921329

Overview
NameFC921329
Unique NameFC921329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig171 contig Ccv1_Contig171:44..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 73/171 (42.69%), Postives = 97/171 (56.73%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCV-SKSYTST 710
            Y +I+ MT N     +IG G    VY   L + + VA+K L     Q  KEF+ E+E +  + H NLVSL GY    +   L Y++M NG L   L G      L W+ RL IA+  A GL YLH  C P ++HRDVKS NILLD+ F+A L DFG+++S  V  +S+ ST
Sbjct:  565 YSEILLMTNNFER--VIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVST 733          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.689e-28
Identity = 73/194 (37.63%), Postives = 108/194 (55.67%), Query Frame = 3
Query:  138 KPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCV-SKSYTSTYI 716
            KP   S   +V    N   + YE++  +T N      +G G    VY   + + + VA+K L     Q  K+F+ E++ +  + H NLV+L GY       +L Y++M NG+L   L G   +  L W+ RL+IA   AQGL YLH  C P +IHRD+KS NILLD +F+A L DFG+++S  V S+++ ST +
Sbjct:  565 KPSKASRSSMVA---NKRSYTYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNV 753          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.689e-28
Identity = 69/172 (40.12%), Postives = 107/172 (62.21%), Query Frame = 3
Query:  207 DIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLK-EFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHG-PTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYI 716
            +++  TE  S++ ++G G    +YK  L +   VA+KRL     +  + +F+TE+E +    HRNL+ L+G+ ++ +  LL Y +M NGS+   L   P     LDW  R  IALG+A+GLAYLH  C  +IIH DVK++NILLD++FEA + DFG+AK +  + S+ +T +
Sbjct:  267 ELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAV 438          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.689e-28
Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            YE I+R T   S    IG+G   + YK  +      A+KRL     Q  ++F  E+  +  ++H NLV L GY  S +   L Y+++  G+L D +     K  ++W    KIAL  A+ L+YLH  CSP+++HRD+K SNILLD ++ A+L+DFG++K L  S+S+ +T
Sbjct:  251 YEIIVRATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIK-ERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTT 419          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.689e-28
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 3
Query:  222 TENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            T+N S    +G G    VYK +L N   +A+KRL S+  Q  +EF+ E+  V  ++H+NLV L G+ +     +L Y+F+ N SL   L  P  K +LDW  R  I  G  +GL YLH D    IIHRD+K+SNILLD D    + DFG+A++  V ++   T
Sbjct:  336 TDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQT 498          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.689e-28
Identity = 69/170 (40.59%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            +  I   T   SE   +G+G    VYK  L   + VAIKRL     Q  +EF+ E++ V  ++HRNL  L GY L     +L Y+F+ N SL   L    K++ LDW  R KI  G A+G+ YLH D    IIHRD+K+SNILLD D    ++DFG+A+   V ++  +T
Sbjct:  337 FSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANT 506          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 72/204 (35.29%), Postives = 113/204 (55.39%), Query Frame = 3
Query:  108 PTHFPDGSLDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCV-SKSYTSTYI 716
            P  F  G++      S+  ++          Y ++++MT+N     ++G G   TVY   L + + VA+K L     Q  KEF+ E+E +  + HR+LV L GY        L Y++ME G L + + G      L W+TR++IA+ AAQGL YLH+ C P ++HRDVK +NILL++  +A L DFG+++S  V  +S+  T +
Sbjct:  534 PRSFTTGTVKSDARSSSSSIITKERKFT---YSEVLKMTKNFER--VLGKGGFGTVYHGNLDDTQ-VAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVV 731          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 68/170 (40.00%), Postives = 100/170 (58.82%), Query Frame = 3
Query:  207 DIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYI 716
            ++   T+N     IIG G    VY   L +   VA+KR      Q + EF+TE++ +  ++HR+LVSL GY   +S  +L Y+FM NG   D L+G      L W  RL+I +G+A+GL YLH   +  IIHRDVKS+NILLD+   A + DFG++K +   +++ ST +
Sbjct:  518 ELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAP-LTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAV 686          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 75/205 (36.59%), Postives = 109/205 (53.17%), Query Frame = 3
Query:   96 RPHNPTHFPDGS------LDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKK------LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIA 674
            R +   HFP G+        +      P + +  + + +  + ++   T++     +IG G+   VY  VL N  P AIK+L S+  Q   EF  ++  V  +KH N V L GY +  +  +L Y+F  NGSL DILHG    K       L W  R+KIA+GAA+GL YLH   +P IIHRD+KSSN+LL +D  A + DF ++
Sbjct:   22 RHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSN-KQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLS 225          
BLAST of FC921329 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAK 677
            Y ++   T+N +    IG G    VYK  L +   VAIKR      Q  KEF TE+E +  + HRNLVSL G+       +L Y++MENG+L D +     K+ LD+  RL+IALG+A+G+ YLH + +P I HRD+K+SNILLD  F A + DFG+++
Sbjct:  615 YAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI-SVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSR 772          
The following BLAST results are available for this feature:
BLAST of FC921329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
Y5169_ARATH2.059e-2842.69Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH2.689e-2837.63Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH2.689e-2840.12Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
RPK1_ARATH2.689e-2838.24Probable LRR receptor-like serine/threonine-protei... [more]
CRK31_ARATH2.689e-2840.49Putative cysteine-rich receptor-like protein kinas... [more]
CRK25_ARATH2.689e-2840.59Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y5189_ARATH3.512e-2835.29Probable LRR receptor-like protein kinase At1g5189... [more]
Y4391_ARATH3.512e-2840.00Probable receptor-like protein kinase At4g39110 OS... [more]
Y2706_ARATH3.512e-2836.59Probable receptor-like protein kinase At2g47060 OS... [more]
Y1684_ARATH3.512e-2843.40Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC32103F12EF RVDevelopN Citrus clementina cDNA clone C32103F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921329 ID=FC921329; Name=FC921329; organism=Citrus clementina; type=EST; length=716bp
ATCCAACGGAACGAGTTACAATTTCTAAAGCAGCTATTCTCGGAATTGCT
CTCGGTGCACTTGTAATTCTTCTCATGATCCTGGTGGCAGCATGCCGACC
ACACAATCCTACTCATTTTCCAGATGGATCACTTGACAAACCAGTTAATT
ACTCCACTCCCAAGTTAGTGATCCTTCACATGAACATGGCACTTCATGTG
TATGAAGACATTATGAGGATGACCGAGAATTTGAGTGAGAAGTACATAAT
TGGTTATGGGGCATCGAGTACAGTGTACAAGTGTGTTCTTAAAAATTGTA
AGCCAGTGGCTATCAAGCGACTTTACTCTCACTATCCACAGTGCTTGAAG
GAATTTGAGACAGAGCTTGAGACGGTTGGGAGCATCAAGCACCGAAATCT
GGTCAGCCTCCAAGGATACTCGTTGTCCTCCTCAGGGAACCTTCTCTTCT
ATGATTTTATGGAAAATGGTAGTCTTTGGGATATTCTTCATGGTCCAACA
AAGAAGAAAAAGCTTGACTGGGACACTCGACTGAAAATAGCACTAGGAGC
TGCACAAGGGCTAGCGTATTTACACCATGATTGTAGTCCTCGAATCATCC
ACCGGGATGTGAAGTCCTCTAATATTCTATTGGACAAGGATTTTGAAGCC
CATCTCACAGATTTTGGAATTGCCAAAAGTTTATGTGTGTCCAAGTCGTA
TACATCTACTTACATC
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