FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 87/213 (40.85%), Postives = 137/213 (64.32%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDV-IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            F Y +++  T NF  + ++GKGG   VY G +   +++AVK+L  S     KEF  E++++  +HH N++SL+G+C E + L LVY+FL  G L+++L G K   +   WS R ++A+  A  LEYLH G    ++HRDVK++NILL ++F+ +L+DFGL++           T +AGT GYL PE +  G++ +K DVY+FG+VLLE++T +
Sbjct:  554 FTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSG-KGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQ 763          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 94/218 (43.12%), Postives = 133/218 (61.01%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R   Y+DL  AT  F    +IG GG   V+KG LP+   +AVK I+  S   ++EFV EIE +  L HKN+++L G+C   N+LLL+YD++  GSL+  L+   ++  A   W+ R+++A G+A  L YLH    + VIHRDVK SN+L+     P+L DFGLA+     +   T T + GT GY+APE    G  +   DV+AFGV+LLE++ GRKP
Sbjct:  353 RRLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSET-TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKP 569          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 88/205 (42.93%), Postives = 136/205 (66.34%), Query Frame = 2
Query:   83 ATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            AT+NF     IG GG  +VYKG L DG ++AVK   P S+  + EF  EIE+++   H++++SL+G+C E+N ++L+Y+++  G+++ +L+G+     +  W +R ++ +G A  L YLH+G ++ VIHRDVKS+NILL ++F  +++DFGL+K           T V G+FGYL PEYF   ++ DK DVY+FGVVL E+L  R
Sbjct:  481 ATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLP--SLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 683          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 89/220 (40.45%), Postives = 142/220 (64.55%), Query Frame = 2
Query:   41 SATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            S  CR F++ ++ +AT NF    ++G GG  +VY+G +  G  ++A+K   P SE  + EF  EIE+++ L H++++SL+G+C E+  ++LVYD+++ G++ E+L+  K    +  W +R ++ +G A  L YLH+G+   +IHRDVK++NILL + +  ++SDFGL+K   T       T V G+FGYL PEYF   ++ +K DVY+FGVVL E L  R
Sbjct:  518 SNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLY--KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCAR 735          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 94/219 (42.92%), Postives = 137/219 (62.56%), Query Frame = 2
Query:   44 ATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            AT R F+   +L AT+ F  EN +G+GG   VYKG LP G+E+AVK L       + EF  E+ ++T L H+N++ LLGFC E N  +LVY+ +   SL+  +    K      W  RY++  GVA  L YLH  S  R+IHRD+K+SNILL  +  P+++DFG+A+  +   +    + V GT+GY+APEY  +G+ + K DVY+FGV+LLE+++G K
Sbjct:  324 ATLR-FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKR-WLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 91/214 (42.52%), Postives = 131/214 (61.21%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F++  +  AT NF   N +G+GG  +VYKG LP+  E+AVK L   S    +EF  E+ I+  L HKN++ LLGFC E +  +LVY+F+S  SL+  L  + K  +   W  RY +  GV   L YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +      V GTFGY+ PEY  +G+ + K DVY+FGV++LE++ G+K
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF-DPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK 539          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 92/235 (39.15%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    2 ELPKELEGLHEK--YSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +L  E E L E    S     F +  + +AT+ F   N +G GG  +VYKG L  G+ +A+K L   S    +EF  E++++  L H+N+  LLG+C +    +LVY+F+   SL+  L  N+K      W  RYK+  G+A  + YLH  S   +IHRD+K+SNILL  D  P++SDFG+A+      +      + GT+GY++PEY ++GK + K DVY+FGV++LEL+TG+K
Sbjct:  314 KLSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKR-RVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKK 547          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.865e-43
Identity = 86/205 (41.95%), Postives = 136/205 (66.34%), Query Frame = 2
Query:   83 ATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            AT +F    +IG GG  +VYKG L D  E+AVK   P S   + EF  E+E++T   H++++SL+G+C E++ +++VY+++ +G+L+++L+ +  D     W +R ++ +G A  L YLH+GS + +IHRDVKS+NILL D+F  +++DFGL+K           T V G+FGYL PEY    ++ +K DVY+FGVV+LE++ GR
Sbjct:  483 ATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLY-DLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGR 686          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.865e-43
Identity = 87/213 (40.85%), Postives = 134/213 (62.91%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +++ +  AT NF   N +G+GG  +VYKG L +G E+AVK L K SE   +EF  E+ ++  L H+N++ LLG+C E    +LVY+F+   SL+  L    K      W++RY +  G+   + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+ +    S      +AGTFGY+ PEY ++G+ + K DVY+FGV++LE++ G+K
Sbjct:  356 DFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQ-GQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKK 567          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.865e-43
Identity = 100/230 (43.48%), Postives = 138/230 (60.00%), Query Frame = 2
Query:   41 SATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD----------GKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            S   + F + +L +AT NF  +NL+G+GG   V+KG +            G  +AVK LKP      KE++ E+  +  L H N++ L+G+C E  N LLVY+F+ +GSLE +L      P    W+ R KVA+G A+ L +LH   +Q VI+RD K++NILL  DF  +LSDFGLAK   T  +    T V GT GY APEY   G++  K DVY+FGVVLLEL++GR+
Sbjct:   68 SPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLT--WAIRMKVAVGAAKGLTFLHEAKSQ-VIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRR 294          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK7_ARATH2.266e-4340.85Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
LRKA1_ARATH2.266e-4343.12Lectin-domain containing receptor kinase A4.1 OS=A... [more]
HERK_ARATH2.266e-4342.93Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
FERON_ARATH2.266e-4340.45Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK36_ARATH2.960e-4342.92Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK31_ARATH2.960e-4342.52Putative cysteine-rich receptor-like protein kinas... [more]
CRK25_ARATH2.960e-4339.15Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y2393_ARATH3.865e-4341.95Probable receptor-like protein kinase At2g39360 OS... [more]
CRK12_ARATH3.865e-4340.85Putative cysteine-rich receptor-like protein kinas... [more]
APK2A_ARATH3.865e-4343.48Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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