FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 89/215 (41.40%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R   Y ++L  T+NF  E ++GKGG   VY G L D  ++AVK+L  S     KEF  E+E++  +HH+N++ L+G+C + +NL L+Y++++ G L+EN+ G K+      W  R ++A+  A+ LEYLH+G    ++HRDVK++NILL++ +  +L+DFGL++           T VAGT GYL PEY+    +++K DVY+FGVVLLE++T +
Sbjct:  554 RRITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLED-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSG-KRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 764          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 84/216 (38.89%), Postives = 143/216 (66.20%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSED-VIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            ++F  + +  AT+ +    ++G+GG   VYKG LPD   +A+K  + ++   + +F+ E+ +++ ++H+N++ +LG C E    LLVY+F++ G+L ++LHG+  D ++  W  R ++A+ VA  L YLHS ++  +IHRD+K++NILL ++   +++DFG +K        +T T V GT GYL PEY+  G +N+K DVY+FGVVL+ELL+G+K
Sbjct:  401 KIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFD-SSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLT-TMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQK 614          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 2
Query:   47 TCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKE---FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            T   +    L  AT++F  EN+IG+G   +VY+   P+GK +A+K +  +   ++E   F+  +  ++ L H NI+ L G+C E    LLVY+++  G+L++ LH N        W+ R KVA+G A+ALEYLH      ++HR+ KS+NILL ++  P LSD GLA     +   ++ T V G+FGY APE+ + G    K DVY FGVV+LELLTGRKP
Sbjct:  379 TASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVS-TQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKP 598          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 89/216 (41.20%), Postives = 136/216 (62.96%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFG---WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +Y+ + +AT++F   N IG+GG   VYKG   +G E+AVK L K SE    EF  E+ ++  L HKN++ +LGF  E    +LVY+++   SL+  L     DPA  G   W++RY +  G+A  + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +    + + GT+GY++PEY M G+ + K DVY+FGV++LE+++GRK
Sbjct:  325 DYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLF----DPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRK 536          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 86/213 (40.38%), Postives = 134/213 (62.91%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +Y+ + +AT++F   N IG+GG  +VYKG   +GKE+AVK L K S     EF  E+ ++  L H+N++ LLGF  +    +LVY+++   SL+  L    K      W +RY +  G+A  + YLH  S   +IHRD+K+SNILL  D  P+++DFG+A+      +    + + GT+GY+APEY M+G+ + K DVY+FGV++LE+++GRK
Sbjct:  340 DYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQ-IQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRK 551          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42
Identity = 89/221 (40.27%), Postives = 136/221 (61.54%), Query Frame = 2
Query:   41 SATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            S + + F  + +  AT  +  + LIG+GG   VY+G L DG+E+AVK+    S    +EF  E+ +++ + H+N++ LLG+C E +  +LVY F+S GSL + L+G         W  R  +A+G A  L YLH+   + VIHRDVKSSNILL      +++DFG +K+A          +V GT GYL PEY+   ++++K DV++FGVVLLE+++GR+P
Sbjct:  579 SVSVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREP 797          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 91/223 (40.81%), Postives = 141/223 (63.23%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK-----WASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKH 709
            +N+ +L SATS+F   + IG+GG  +VYKG LP G  +AVK  +  S    KEF  EIE+++ LHH+N++SLLG+C +    +LVY+++  GSL++ L    + P +   + R ++A+G A  + YLH+ +   +IHRD+K SNILL     P+++DFG++K            H+T T V GT GY+ PEY++  ++ +K DVY+ G+V LE+LTG +P  H
Sbjct:  619 YNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSL--ALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVT-TIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISH 838          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 89/215 (41.40%), Postives = 137/215 (63.72%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F Y ++L  T NF  E ++GKGG   VY G L D  ++AVK+L  S     KEF  E+E++  +HH++++ L+G+C + +NL L+Y+++ +G L EN+ G K       W  R ++A+  A+ LEYLH+G    ++HRDVK +NILL++  + +L+DFGL++           T VAGT GYL PEY+    +++K DVY+FGVVLLE++T +
Sbjct:  558 RKFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDD-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSG-KHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 768          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 94/228 (41.23%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   32 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK----EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPY 703
            E Y    + F+ ++LL AT  F   N++GKG    +YKG L D   +AVK L  +E+  K    +F  E+E+I+   H+N++ L GFC      LLVY +++ GS+   L    +   A  W +R  +A+G A  L YLH    Q++IH DVK++NILL ++FE  + DFGLAK  + + SH+T T V GT G++APEY   GK ++K DV+ +GV+LLEL+TG+K +
Sbjct:  254 EVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRL--NEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAF 478          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 87/209 (41.63%), Postives = 127/209 (60.77%), Query Frame = 2
Query:  107 NLIGKGGSSQVYKGCLPDGKELAVKILKP-----------SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            N+IGKG S  VYK  +P+ + +AVK L P           S  V   F  E++ + ++ HKNI+  LG C+  N  LL+YD++S GSL   LH  +    + GW  RYK+ +G A+ L YLH      ++HRD+K++NIL+  DFEP + DFGLAK         +   +AG++GY+APEY    K+ +K DVY++GVV+LE+LTG++P
Sbjct:  789 NVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLH-ERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQP 996          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5188_ARATH8.611e-4341.40Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH8.611e-4338.89Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
SRF8_ARATH1.125e-4241.18Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK7_ARATH1.125e-4241.20Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK6_ARATH1.125e-4240.38Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
NORK_PEA1.918e-4240.27Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5374_ARATH2.505e-4240.81Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH2.505e-4241.40Probable LRR receptor-like protein kinase At1g5189... [more]
SERK5_ARATH2.505e-4241.23Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
RCH1_ARATH2.505e-4241.63LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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