FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.284e-46
Identity = 90/224 (40.18%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   32 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            E Y    R+FN ++L  AT NF    ++G GG   VYKG L DG+ +AVK  K   ED ++EF+ E+ I++ ++H++++ LLG C E    +LVY+F+  G+L +++H  + D     W  R ++A+ +A AL YLHS ++  + HRD+KS+NILL + +  +++DFG ++  +   +H T T ++GT GY+ PEY+   +  +K DVY+FGV+L EL+TG KP
Sbjct:  432 EGYVEKTRVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWT-TVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKP 654          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.284e-46
Identity = 100/222 (45.05%), Postives = 133/222 (59.91%), Query Frame = 2
Query:   38 YSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            +S  C+  + ++LL +T+NF   N+IG GG   VYK   PDG + AVK L      + +EF  E+E ++   HKN++SL G+C   N+ LL+Y F+  GSL+  LH          W  R K+A G A  L YLH      VIHRDVKSSNILL + FE  L+DFGLA+      +H+T TD+ GT GY+ PEY        + DVY+FGVVLLEL+TGR+P
Sbjct:  735 HSCGCKDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVT-TDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRP 955          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.284e-46
Identity = 93/219 (42.47%), Postives = 141/219 (64.38%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R   +  LL AT+ F AE ++G GG  +VYK  L DG  +A+K +++ +    +EF+ E+E I  + H+N++ LLG+C      LLVY+++  GSLE  LH   +KK      W+ R K+A+G A  L +LH      +IHRD+KSSN+LL +DFE ++SDFG+A+  S   +H++ + +AGT GY+ PEY+   +   K DVY++GV+LLELL+G+KP
Sbjct:  845 RKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1063          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.677e-46
Identity = 94/232 (40.52%), Postives = 151/232 (65.09%), Query Frame = 2
Query:   29 HEKYSATC---------RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            H+  +A+C         R F +Q+++ AT+ F   +L+G GG  +VYKG L DG ++AVK   P SE  + EF  EIE+++ L H++++SL+G+C E + ++LVY++++ G L  +L+G    P +  W +R ++ +G A  L YLH+G++Q +IHRDVK++NILL ++   +++DFGL+K   +       T V G+FGYL PEYF   ++ +K DVY+FGVVL+E+L  R
Sbjct:  479 HKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLS--WKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCR 708          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.190e-46
Identity = 93/217 (42.86%), Postives = 142/217 (65.44%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            ++F+  +L  AT NF    ++G+GG   VYKG L DG+ +AVK  K   ED ++EF+ E+ ++  ++H+NI+ LLG C E    +LVY+F+  G L + L  ++ D     W  R  +A+ +A AL YLHS ++  + HRD+K++NILL + ++ ++SDFG ++  +   +H+T T VAGTFGY+ PEYF   K  DK DVY+FGVVL+EL+TG+ P
Sbjct:  410 KIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLR-DECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLT-TQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNP 624          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.860e-46
Identity = 92/217 (42.40%), Postives = 145/217 (66.82%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            ++F+ ++L  AT NF  + ++G+GG   VYK  L DG  +AVK  K   ED ++EF+ EI +++ ++H+NI+ LLG C E    +LVY+++  G L + LH ++ D     W  R ++A+ +A AL Y+HS ++  + HRD+K++NILL + +  ++SDFG ++  +T  +H+T T VAGTFGY+ PEYF+  +   K DVY+FGVVL+EL+TG KP
Sbjct:  414 KIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLH-DEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLT-TLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKP 628          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.878e-46
Identity = 92/214 (42.99%), Postives = 136/214 (63.55%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILK-PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+++++ +ATSNF  +N++G+GG   VYKG LP+G  +AVK LK P      +F  E+E+I    H+N++ L GFC      +LVY ++  GS+ + L  N  +  +  W+ R  +A+G A  L YLH     ++IHRDVK++NILL + FE  + DFGLAK      SH+T T V GT G++APEY   G+ ++K DV+ FGV++LEL+TG K
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVT-TAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHK 500          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.878e-46
Identity = 97/226 (42.92%), Postives = 141/226 (62.39%), Query Frame = 2
Query:   32 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKE--FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPY 703
            E +    + F  ++LL AT NF  +N++G+GG  +VYKG L DG  +AVK LK       E  F  E+E+I+   H+N++ L GFC      LLVY +++ GS+   L    +   A  W +R  +A+G A  L YLH    Q++IHRDVK++NILL ++FE  + DFGLAK  + + SH+T T V GT G++APEY   GK ++K DV+ +GV+LLEL+TG+K +
Sbjct:  273 EVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAF 497          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.371e-46
Identity = 95/219 (43.38%), Postives = 146/219 (66.67%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKI-LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK-DP---AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F + +L +AT NF    + G GG  +VY G +  G ++A+K   + SE  I EF  EI++++ L H++++SL+GFC E+  ++LVY+++S G L ++L+G+K+ DP       W +R ++ +G A  L YLH+G+AQ +IHRDVK++NILL ++   ++SDFGL+K A     H++ T V G+FGYL PEYF   ++ DK DVY+FGVVL E+L  R
Sbjct:  511 RYFPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVS-TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 728          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.371e-46
Identity = 97/212 (45.75%), Postives = 147/212 (69.34%), Query Frame = 2
Query:   65 YQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            + D+LSAT+NF  + LIGKGG   VYK  LPDG + A+K  K  S   I EF  EI++++ + H++++SL G+C E++ ++LVY+F+ +G+L+E+L+G+  +  +  W +R ++ +G A  L+YLH SGS   +IHRDVKS+NILL +    +++DFGL+K  +   S+I+  ++ GTFGYL PEY    K+ +K DVYAFGVVLLE+L  R
Sbjct:  478 FTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGS--NLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNIS-INIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFAR 686          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLN_ARATH1.284e-4640.18Wall-associated receptor kinase-like 18 OS=Arabido... [more]
PSKR2_ARATH1.284e-4645.05Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL1_ARATH1.284e-4642.47Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
THE1_ARATH1.677e-4640.52Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
WAKLD_ARATH2.190e-4642.86Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLC_ARATH2.860e-4642.40Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y5457_ARATH4.878e-4642.99Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH4.878e-4642.92Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5613_ARATH6.371e-4643.38Probable receptor-like protein kinase At5g61350 OS... [more]
Y2232_ARATH6.371e-4645.75Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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