FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.321e-46
Identity = 96/218 (44.04%), Postives = 143/218 (65.60%), Query Frame = 2
Query:   56 LFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK---EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENL-HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            L + Q L S T+NF ++N++G GG   VYKG L DG ++AVK ++      K   EF  EI ++T + H+++++LLG+C + N  LLVY+++ +G+L  +L   +++      W +R  +A+ VA  +EYLH  + Q  IHRD+K SNILL DD   +++DFGL + A      I  T +AGTFGYLAPEY + G+V  K+DVY+FGV+L+EL+TGRK
Sbjct:  575 LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRK 791          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.321e-46
Identity = 95/214 (44.39%), Postives = 138/214 (64.49%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILK-PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAST--SSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            +++ L +AT NF  EN +G+GG   VYKG    G+E+AVK L   S     EF  EI ++  L H+N++ LLGFC E    +LVY+F+   SL+  +   KK      W  RYK+  GVA  L YLH  S  R+IHRD+K+SNILL  +  P+++DFGLAK   T  +S+H   + +AGT+GY+APEY +YG+ + K DV++FGV+++E++TG+
Sbjct:  350 DFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL-LDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGK 562          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.321e-46
Identity = 97/238 (40.76%), Postives = 144/238 (60.50%), Query Frame = 2
Query:   14 ELEGLHEKYSATCRLFN-------YQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF-GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            +L  +HE  S     F        +  LL AT+ F A+++IG GG   VYK  L DG  +A+K +++ +    +EF+ E+E I  + H+N++ LLG+C      LLVY+++  GSLE  LH   K    F  WS R K+A+G A  L +LH      +IHRD+KSSN+LL  DF  ++SDFG+A+  S   +H++ + +AGT GY+ PEY+   +   K DVY++GV+LLELL+G+KP
Sbjct:  824 KLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1061          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.087e-45
Identity = 89/222 (40.09%), Postives = 144/222 (64.86%), Query Frame = 2
Query:   35 KYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            K++ +   F Y+ L  AT  F  + ++G+GG+  V+ G LP+GK +AVK ++  + D ++EF  E+ +I+ + HKN++ LLG   E    LLVY+++   SL++ L  ++       WS+R  + +G AE L YLH GS  R+IHRD+K+SN+LL D   P+++DFGLA+      +H++ T +AGT GY+APEY + G++ +K DVY+FGV++LE+  G +
Sbjct:  295 KFNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLF-DESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLS-TGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTR 514          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.419e-45
Identity = 94/217 (43.32%), Postives = 139/217 (64.06%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYK 706
            F+ + +++AT+NF  EN +G+GG   VYKG LP G+E+AVK L K S     EF  E+ ++T L H+N++ LLGFC E +  +LVY+F+   SL+  +   +K      W  RY +  GVA  L YLH  S  R+IHRD+K+SNILL  +  P+++DFG+A+      +    + V GT+GY+APEY  YG+ + K DVY+FGV+LLE+++G+   K
Sbjct:  333 FDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKR-RVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKK 548          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.419e-45
Identity = 92/217 (42.40%), Postives = 142/217 (65.44%), Query Frame = 2
Query:   56 LFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW--ASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            L +++ L +AT NF +EN +G+GG   VYKG  P G+E+AVK L   S     EF  EI ++  L H+N++ L+GFC +    LLVY+F+   SL++ +   +K      W  RYK+  G+A  L YLH  S  R+IHRD+K+SNILL  +  P+++DFGLAK   +  + +H   + +AGT+GY+APEY M+G+ + K DV++FGV+++E++TG++
Sbjct:  344 LVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQL-LDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKR 559          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.419e-45
Identity = 92/216 (42.59%), Postives = 138/216 (63.89%), Query Frame = 2
Query:   50 CRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            CR F+  ++   T NF   N+IG GG  +VYKG +    ++AVK   P SE  + EF  EIE+++ L HK+++SL+G+C E   + LVYD+++ G+L E+L+  KK      W  R ++A+G A  L YLH+G+   +IHRDVK++NIL+ +++  ++SDFGL+K     +     T V G+FGYL PEYF   ++ +K DVY+FGVVL E+L  R
Sbjct:  502 CRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLT--WKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCAR 715          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.854e-45
Identity = 90/217 (41.47%), Postives = 143/217 (65.90%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R+F+ ++L  AT NF    ++G+GG   VYKG L DG+ +AVK  K   ED ++EF+ E+ I++ ++H++++ LLG C E     LVY+F+  G+L +++H  + D     W  R ++A+ +A AL YLHS ++  + HRD+KS+NILL + +  ++SDFG ++  +   +H T T ++GT GY+ PEY+   +  DK DVY+FGVVL+EL+TG KP
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIH-EESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWT-TVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKP 651          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.854e-45
Identity = 91/219 (41.55%), Postives = 140/219 (63.93%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R   +  L+ AT+ F A ++IG GG  +V+K  L DG  +A+K +++ S    +EF+ E+E +  + H+N++ LLG+C      LLVY+F+  GSLEE LHG +  +     GW ER K+A G A+ L +LH      +IHRD+KSSN+LL  D E ++SDFG+A+  S   +H++ + +AGT GY+ PEY+   +   K DVY+ GVV+LE+L+G++P
Sbjct:  824 RKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRP 1042          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45
Identity = 99/233 (42.49%), Postives = 143/233 (61.37%), Query Frame = 2
Query:    2 ELPKELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            ++ KEL GL  +       F  + + +AT NF     IG+GG   VYKG L +GK +AVK L   S    +EFV EI +I+ L H N++ L G C E N L+LVY++L    L   L G ++       WS R K+ +G+A+ L +LH  S  +++HRD+K+SN+LL  D   ++SDFGLAK     ++HI+ T +AGT GY+APEY M G + +K DVY+FGVV LE+++G+
Sbjct:  651 DIDKELRGLDLQTGT----FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHIS-TRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK 878          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TMK1_ARATH8.321e-4644.04Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK28_ARATH8.321e-4644.39Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
BRL3_ARATH8.321e-4640.76Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
CRK42_ARATH1.087e-4540.09Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK37_ARATH1.419e-4543.32Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK29_ARATH1.419e-4542.40Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
ANX1_ARATH1.419e-4542.59Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
WAKLK_ARATH1.854e-4541.47Putative wall-associated receptor kinase-like 11 O... [more]
BRL2_ARATH1.854e-4541.55Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y1765_ARATH2.421e-4542.49Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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