FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 66/234 (28.21%), Postives = 115/234 (49.15%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAE---------NLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG---TFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLT-GRKPY 703
            F Y+D   A   F  E          +IG G   +V  G L  P  +E+  A+K LK   +E   ++F+ E  I+    H N+I L G   + + ++++ +F+  GSL+  L  N      F   +   +  G+A  ++YL   +    +HRD+ + NIL++ +   ++SDFGL+++    +S  T T   G      + APE   Y K     DV+++G+V+ E+++ G +PY
Sbjct:  618 FTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 845          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: AURKB_HUMAN (Serine/threonine-protein kinase 12 OS=Homo sapiens GN=AURKB PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  113 IGKGGSSQVYKGCLPDGKE----LAVKILKPS----EDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYK 706
            +GKG    VY   L   K+    +A+K+L  S    E V  +   EIEI   LHH NI+ L  + ++   + L+ ++  RG L + L  +      F       +   +A+AL Y H    ++VIHRD+K  N+LL    E +++DFG +  A +      C    GT  YL PE       N+K+D++  GV+  ELL G  P++
Sbjct:   83 LGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS----CTFDEQRTATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 274          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: ABL_FSVHY (Tyrosine-protein kinase transforming protein Abl OS=Feline sarcoma virus (strain Hardy-Zuckerman 2) GN=ABL PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD-GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT---FGYLAPEYFMYGKVNDKIDVYAFGVVLLELLT-GRKPY 703
            NY       ++   ++ +G G   +VY+G        +AVK LK     ++EF+ E  ++  + H N++ LLG C  +    ++ +F++ G+L + L   N+++  A        +A  ++ A+EYL     +  IHRD+ + N L+ ++   +++DFGL++  +      T T  AGT     + APE   Y K + K DV+AFGV+L E+ T G  PY
Sbjct:  180 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGTKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 389          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: TLK2_XENTR (Serine/threonine-protein kinase tousled-like 2 OS=Xenopus tropicalis GN=tlk2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 74/257 (28.79%), Postives = 127/257 (49.42%), Query Frame = 2
Query:   11 KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILK--------PSEDVIKEFVLEIEIITTLHHKNIISLLG-FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF---EPQLSDFGLAK------WASTSSSHITCTDVAGTFGYLAPEYFMYGK----VNDKIDVYAFGVVLLELLTGRKPYKHD 712
            +EL+ +H + ++      ++D  +    +L  +L+G+GG S+VYK   L + + +AVKI +          E+  K    E  I   L H  I+ L   F  + ++   V ++     L+  L  +K         E   + M +  AL+YL+      +IH D+K  NILL +     E +++DFGL+K      + S     +T +  AGT+ YL PE F+ GK    +++K+DV++ GV+  + L GRKP+ H+
Sbjct:  364 RELKRIHNEDNS-----QFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK----LMTEKEARSIIMQIVNALKYLNEIKPP-IIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELT-SQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 609          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: TESK2_RAT (Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 61/207 (29.47%), Postives = 108/207 (52.17%), Query Frame = 2
Query:   77 LSATSNFLAENLIGKGGSSQVYK-GCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDD---FEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELL 685
            L++  +F  E  IG G  S+V+K      G+ +A+K+   S +     + E++++  L H NI+  +G C     L  + ++++ G+LE+ L  N   P    W+ R K+A  +A  L YLH    + + HRD+ S N L+  D   +   ++DFGLA+    +S       V G+  ++APE       N+K DV+++G++L E++
Sbjct:   53 LTSLDDFTREK-IGSGFFSEVFKVRHRASGQVMALKMNTLSSNRAN-LLKEMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLLDSNLYLP----WTVRVKLAYDIAVGLSYLH---FKGIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIPDASIGSEKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEII 250          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: STK6_XENLA (Serine/threonine-protein kinase 6 OS=Xenopus laevis GN=aurka PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 66/206 (32.04%), Postives = 107/206 (51.94%), Query Frame = 2
Query:  113 IGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDK-IDVYAFGVVLLELLTGRKPYKHD 712
            +GKG    VY     + K  LA+K+L  S+     V  +   E+EI + L H NI+ L G+  + + + L+ D+   G L   L    +    F           +AEAL Y HS   ++VIHRD+K  N+LL  + E +++DFG +  A +S      T + GT  YL PE  + G+++D+ +D+++ GV+  E L G+ P++ D
Sbjct:  146 LGKGKFGNVYLARERESKFILALKVLFKSQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDASRVYLILDYAPGGELFRELQKCTR----FDDQRSAMYIKQLAEALLYCHS---KKVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDETVDLWSLGVLCYEFLVGKPPFETD 339          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: STK25_BOVIN (Serine/threonine-protein kinase 25 OS=Bos taurus GN=STK25 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 61/204 (29.90%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  113 IGKGGSSQVYKGCLPDGKEL-AVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKHDH 715
            IGKG   +VYKG     KE+ A+KI  L+ +ED I++   EI +++      I    G   +   L ++ ++L  GS  + L      P     +    +   + + L+YLHS   +R IHRD+K++N+LLS+  + +L+DFG+A     + + I      GT  ++APE       + K D+++ G+  +EL  G  P    H
Sbjct:   26 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 219          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PLK4_DROME (Serine/threonine-protein kinase PLK4 OS=Drosophila melanogaster GN=SAK PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 62/213 (29.11%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   92 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILKPS----EDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA-KWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKHD 712
            ++  ++L+GKGG + VYK  CL   +++A+K++         +      E+EI + L H +++ L  F  + N + LV +    G L   ++   +    F  +E   +   V   L YLHS     ++HRD+  SN+LLS +   +++DFGLA +       H+T   + GT  Y++PE           DV++ G +L  LL GR P++ D
Sbjct:   13 DYEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIARP---FTETEAASILKQVVAGLLYLHS---HNIMHRDISLSNLLLSREMHVKIADFGLATQLKRPDERHMT---MCGTPNYISPEVVSRTSHGLPADVWSVGCMLYTLLVGRPPFETD 216          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PLK4_AEDAE (Serine/threonine-protein kinase PLK4 OS=Aedes aegypti GN=SAK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 62/204 (30.39%), Postives = 98/204 (48.04%), Query Frame = 2
Query:  110 LIGKGGSSQVYKG-CLPDGKELAVKI----LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA-KWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPY 703
            ++GKGG + VY+  CL  G  +A+K+    L  S  +      E+ I + L H +I+ L  F  + +++ LV +    G L+  L   KK    F   E   V   V + L YLHS     ++HRD+  +N+LL+     ++SDFGLA +       H+T   + GT  Y++PE           DV+  G +L   L G+ P+
Sbjct:   15 ILGKGGFASVYRARCLGSGTFVAIKMIDKKLMQSSGMANRVRQEVSIHSQLKHPSILELYTFFEDASHVYLVLELAENGELQRYLRETKK---TFNEYEAASVLKQVVDGLLYLHS---HHILHRDMSLANLLLTKQMTVKISDFGLATQLTRPDEKHMT---LCGTPNYISPEVASRASHGLPADVWGLGCMLYTFLVGKPPF 209          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PHKG2_MOUSE (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Mus musculus GN=Phkg2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 2
Query:  104 ENLIGKGGSSQVYKGCL--PDGKELAVKILKPS---------EDVIKEFVLEIEIITTLH-HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFM---------YGKVNDKIDVYAFGVVLLELLTGRKPYKH 709
            +++IG+G SS V + C+    G E AVKI++ S         E+V      E+ I+  +  H +II+L+      + + LV+D + +G L + L     +  A    E   +   + EA+ +LH   A  ++HRD+K  NILL D+ + +LSDFG +             ++ GT GYLAPE            YGK   ++D++A GV+L  LL G  P+ H
Sbjct:   27 KDIIGRGVSS-VVRRCVHRATGDEFAVKIMEVSAERLSLEQLEEVRDATRREMHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEAGEK---LRELCGTPGYLAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAGSPPFWH 235          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHB2_CHICK8.116e-1728.21Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
AURKB_HUMAN8.116e-1731.55Serine/threonine-protein kinase 12 OS=Homo sapiens... [more]
ABL_FSVHY8.116e-1729.55Tyrosine-protein kinase transforming protein Abl O... [more]
TLK2_XENTR1.060e-1628.79Serine/threonine-protein kinase tousled-like 2 OS=... [more]
TESK2_RAT1.060e-1629.47Dual specificity testis-specific protein kinase 2 ... [more]
STK6_XENLA1.060e-1632.04Serine/threonine-protein kinase 6 OS=Xenopus laevi... [more]
STK25_BOVIN1.060e-1629.90Serine/threonine-protein kinase 25 OS=Bos taurus G... [more]
PLK4_DROME1.060e-1629.11Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_AEDAE1.060e-1630.39Serine/threonine-protein kinase PLK4 OS=Aedes aegy... [more]
PHKG2_MOUSE1.060e-1631.39Phosphorylase b kinase gamma catalytic chain, test... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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