FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45
Identity = 94/215 (43.72%), Postives = 146/215 (67.91%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F Y D+   T+NF  + +IGKGG   VY+GCL + ++ A+K+L  S     KEF  E+E++  +HH+ ++SL+G+C +DN L L+Y+ + +G+L+E+L G K   +   W  R K+A+  A  +EYLH+G   +++HRDVKS+NILLS++FE +++DFGL++ +    +    T VAGTFGYL PEY     ++ K DVY+FGVVLLE+++G+
Sbjct:  548 RRFTYSDVNKMTNNF--QVVIGKGGFGVVYQGCL-NNEQAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSG-KPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSR-SFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQ 757          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45
Identity = 90/228 (39.47%), Postives = 146/228 (64.04%), Query Frame = 2
Query:   20 EGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            +G+ EK     R+F  ++L  AT NF    ++G GG   VYKG L DG+ +AVK  K   ED ++EF+ E+ I++ ++H++++ LLG C E    +LVY+F+  G+L +++H  + D     W  R ++A+ +A AL YLHS ++  + HRD+KS+NILL + +  +++DFG ++  +   +H T T ++GT GY+ PEY+   +  +K DVY+FGV+L EL+TG KP
Sbjct:  423 QGVVEK----ARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWT-TVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKP 645          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.162e-45
Identity = 95/215 (44.19%), Postives = 138/215 (64.19%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            ++ +D++        E++IG GG   VYK  + DGK  A+K ILK +E   + F  E+EI+ ++ H+ +++L G+C    + LL+YD+L  GSL+E LH   +      W  R  + +G A+ L YLH   + R+IHRD+KSSNILL  + E ++SDFGLAK      SHIT T VAGTFGYLAPEY   G+  +K DVY+FGV++LE+L+G++P
Sbjct:  294 YSSKDIIKKLEMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQ---LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRP 504          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.130e-45
Identity = 91/214 (42.52%), Postives = 138/214 (64.49%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+++ + +AT  F   N +G+GG  QVYKG LP+G ++AVK L K S    KEF  E+ ++  L H+N++ LLGFC E    +LVY+F+S  SL+  L  ++   +   W+ RYK+  G+A  + YLH  S   +IHRD+K+ NILL  D  P+++DFG+A+      +      V GT+GY++PEY MYG+ + K DVY+FGV++LE+++GRK
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQ-SQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRK 540          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.394e-45
Identity = 92/215 (42.79%), Postives = 136/215 (63.26%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDV-IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R   Y ++L  T+NF  E +IG+GG   VY G L D +++AVK+L PS     KEF  E+E++  +HH N++SL+G+C E  +L L+Y++++ G L+ +L G   D     W  R  +A+  A  LEYLHSG    ++HRDVKS NILL + F+ +L+DFGL++  S        T V GT GYL PEY+   ++ +K DVY+FG+VLLE++T +
Sbjct:  561 RRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGD-CVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQ 772          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.394e-45
Identity = 94/215 (43.72%), Postives = 133/215 (61.86%), Query Frame = 2
Query:   56 LFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +  + D++  T N   + +IG G SS VYK  L   + +A+K L       ++EF  E+E I ++ H+NI+SL G+       LL YD++  GSL + LHG+ K      W  R K+A+G A+ L YLH     R+IHRD+KSSNILL ++FE  LSDFG+AK    S +H + T V GT GY+ PEY    ++N+K D+Y+FG+VLLELLTG+K
Sbjct:  635 IHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKK-VKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHAS-TYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKK 847          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45
Identity = 97/224 (43.30%), Postives = 136/224 (60.71%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP--------SEDVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            F  +D+L AT  F    ++G+G    VYK  +P GK +AVK L+         S +    F  EI  +  + H+NI+ L  FC+    N+ LL+Y+++SRGSL E LHG K    +  W  R+ +A+G AE L YLH     R+IHRD+KS+NIL+ ++FE  + DFGLAK      S  + + VAG++GY+APEY    KV +K D+Y+FGVVLLELLTG+ P
Sbjct:  807 FTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSH--SMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSK-SVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAP 1027          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45
Identity = 97/224 (43.30%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA------STSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKH 709
            F Y +L  AT NF +   IG+GG  +VYKG L  G  +A+K  +  S    KEF+ EIE+++ LHH+N++SLLGFC E+   +LVY+++  G+L +N+    K+P  F  + R ++A+G A+ + YLH+ +   + HRD+K+SNILL   F  +++DFGL++ A        S  H++ T V GT GYL PEYF+  ++ DK DVY+ GVVLLEL TG +P  H
Sbjct:  613 FTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDF--AMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVS-TVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITH 833          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45
Identity = 89/218 (40.83%), Postives = 145/218 (66.51%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R+F+ ++L  AT NF    ++G+GG   VYKG L +G+ +AVK  K   E  ++EF+ E+ +++ ++H+NI+ LLG C      +LVY+++  G L + LH  ++ +     W  R ++A+ +A AL Y+HS ++  + HRD+K++NILL + +  ++SDFG ++  + + +H+T T VAGTFGY+ PEYF+  +  DK DVY+FGVVL+EL+TG KP
Sbjct:  418 RIFSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLT-TLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 634          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45
Identity = 91/218 (41.74%), Postives = 141/218 (64.68%), Query Frame = 2
Query:   47 TCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            +C  F Y+ L  AT +F     +G+GG+  VYKG LPDG+ +AVK +   + +   +F  E+ +I+ + HKN++ LLG   E    LLVY+++   SL++ L   K       W +R+ + +G++E LEYLH GS  ++IHRD+K+SNILL  +  P+++DFGL +   T  +  T T +AGT GYLAPEY + G++ +K DVYAFGV+++E++TG+K
Sbjct:  302 SCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILF-MKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQ-TNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKK 517          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1755_ARATH2.421e-4543.72Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH2.421e-4539.47Wall-associated receptor kinase-like 17 OS=Arabido... [more]
FEI1_ARATH3.162e-4544.19LRR receptor-like serine/threonine-protein kinase ... [more]
CRK5_ARATH4.130e-4542.52Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y5169_ARATH5.394e-4542.79Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH5.394e-4543.72LRR receptor-like serine/threonine-protein kinase ... [more]
Y2317_ARATH7.044e-4543.30Probable leucine-rich repeat receptor-like protein... [more]
Y1684_ARATH7.044e-4543.30Probable LRR receptor-like serine/threonine-protei... [more]
WAKLF_ARATH7.044e-4540.83Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK1_ARATH7.044e-4541.74Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
back to top