FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.329e-43
Identity = 88/214 (41.12%), Postives = 137/214 (64.02%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+   ++ AT +F +EN +G+GG   VYKG  P+G+E+AVK L K S     EF  E+ ++T L HKN++ LLGFC E +  +LVY+F+   SL+  +    K  +   W  R+++  G+A  L YLH  S  ++IHRD+K+SNILL  +  P+++DFG A+   +  +      +AGT GY+APEY  +G+++ K DVY+FGV+LLE+++G +
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKR-SLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.329e-43
Identity = 89/214 (41.59%), Postives = 139/214 (64.95%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+   +L+AT  F +EN +G+GG   VYKG L +G+E+AVK L K S     EF  E+ ++T L H+N++ LLGFC E +  +LVY+F+   SL+  +  ++K  +   W  RY++  G+A  L YLH  S  ++IHRD+K+SNILL  +  P+++DFG A+   +  +      +AGT GY+APEY  +G+++ K DVY+FGV+LLE+++G +
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKR-SLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 553          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 95/212 (44.81%), Postives = 132/212 (62.26%), Query Frame = 2
Query:   65 YQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            Y+D++  T N   + +IG G SS VYK  L + K +A+K L   +   +K+F  E+E+++++ H+N++SL  +       LL YD+L  GSL + LHG  K      W  R K+A G A+ L YLH   + R+IHRDVKSSNILL  D E +L+DFG+AK    S SH T T V GT GY+ PEY    ++ +K DVY++G+VLLELLT RK
Sbjct:  638 YEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKT-LDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSH-TSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRK 847          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 84/214 (39.25%), Postives = 136/214 (63.55%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F+++ + +AT+ F   N +G+GG  +VYKG  P G ++AVK L K S    +EF  E+ ++  L H+N++ LLGFC E +  +LVY+F+   SL+  +  +    +   W+ RYK+  G+A  + YLH  S   +IHRD+K+ NILL DD   +++DFG+A+      +      + GT+GY++PEY MYG+ + K DVY+FGV++LE+++G+K
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQ-SLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKK 551          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 99/233 (42.49%), Postives = 142/233 (60.94%), Query Frame = 2
Query:   11 KELEGLHEK---YSATCRL-FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            K   G++E    Y    +L F+++ +L+AT +F  EN IG+GG   VYKG LP G+E+AVK L + S     EF  E+ ++T L H+N++ LLGFC E +  +LVY+F+   SL+  +   +K      W  R ++  GVA  L YLH  S  R+IHRD+K+SNILL     P+++DFG+A+  +   +      V GTFGY+APEY      + K DVY+FGVVLLE++TGR
Sbjct:  307 KSYNGINEAQYDYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKR-LLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 91/233 (39.06%), Postives = 143/233 (61.37%), Query Frame = 2
Query:   11 KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYK 706
            K++E + +    +   F Y  L  AT +F   N +G+GG   VYKG LPDG+++AVK +   +     +F  E+ +I+T+ HKN++ LLG        LLVY++L   SL+  +    +      W  RY + +G AE L YLH  S+ ++IHRD+K+SNILL    + +++DFGLA+      SHI+ T +AGT GY+APEY  +G++ + +DVY+FGV++LE++TG++  K
Sbjct:  297 KDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKT-LDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHIS-TAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTK 527          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 91/226 (40.27%), Postives = 138/226 (61.06%), Query Frame = 2
Query:   32 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKE--FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPY 703
            E +    + F+ ++L  A+ NF  +N++G+GG  +VYKG L DG  +AVK LK       E  F  E+E+I+   H+N++ L GFC      LLVY +++ GS+   L    +      W +R ++A+G A  L YLH     ++IHRDVK++NILL ++FE  + DFGLAK      +H+T T V GT G++APEY   GK ++K DV+ +GV+LLEL+TG++ +
Sbjct:  268 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 492          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 86/213 (40.38%), Postives = 140/213 (65.73%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            F Y ++L+ T+NF  + ++GKGG   VY G +   +++AVK+L  S     K+F  E+E++  +HHKN++ L+G+C E + L L+Y++++ G L+E++ G K+  +   W  R K+A+  A+ LEYLH+G    ++HRDVK++NILL++ F+ +L+DFGL++           T VAGT GYL PEY+    + +K DVY+FGVVLL ++T +
Sbjct:  567 FTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSG-KRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQ 776          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 88/219 (40.18%), Postives = 137/219 (62.56%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSE-DVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKHD 712
            + Y ++L+ T  F  E ++GKGG   VY G +   +E+AVK+L PS     KEF  E+E++  ++H N++SL+G+C E ++L L+Y ++  G L+++  G+    +   W +R  +A+  A  LEYLH G    ++HRDVKSSNILL D  + +L+DFGL++           T VAGTFGYL  EY+   ++++K DVY+FGVVLLE++T +    H+
Sbjct:  560 YTYAEVLAMTKKF--ERVLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSGS----SIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHN 772          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 90/215 (41.86%), Postives = 137/215 (63.72%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F   ++ +AT NF     IG GG  +VY+G L DG  +A+K   P S+  + EF  EI +++ L H++++SL+GFC E N ++LVY++++ G+L  +L G+   P +  W +R +  +G A  L YLH+GS + +IHRDVK++NILL ++F  ++SDFGL+K   +       T V G+FGYL PEYF   ++ +K DVY+FGVVL E +  R
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLS--WKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCAR 718          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK40_ARATH1.329e-4341.12Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK39_ARATH1.329e-4341.59Putative cysteine-rich receptor-like protein kinas... [more]
ERECT_ARATH1.735e-4344.81LRR receptor-like serine/threonine-protein kinase ... [more]
CRK4_ARATH1.735e-4339.25Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK38_ARATH1.735e-4342.49Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK2_ARATH1.735e-4339.06Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
BAK1_ARATH1.735e-4340.27BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5181_ARATH2.266e-4340.38Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH2.266e-4340.18Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH2.266e-4341.86Probable receptor-like protein kinase At1g30570 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
back to top