FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.768e-38
Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = 3
Query:  255 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVE-DVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            QQ+ DR+  LPGQ   V F  Y GYVT+++ +GRAL+YWF E D  DP + PLVLWLNGGPGCSSI  G  +E+GPF +  + ++L LN Y+WN+ ANILF +SP GV FSYSNTSSD++  GD + A+D+  F     +RF
Sbjct:   59 QQEDDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSM-GDDKMAQDTYTFLVKWFERF 199          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36
Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANG---DKRTAEDSLNFY*SG*KRF 677
            D + KLPGQ   ++F  Y GYV VNE + R L+Y+FVE ++   S PLVLW NGGPGCSS+ +G  EE+GPF +  D KTLY NPYSWN  AN+LF + P+ VGFSYS+T  D    G   DK TAED+  F  +  +RF
Sbjct:   62 DLIEKLPGQPSGISFRQYGGYVAVNEPATRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFRVHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERF 201          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35
Identity = 72/129 (55.81%), Postives = 93/129 (72.09%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D V +LPGQ  NV F  ++GYV V+ E+GR+LFY++VE V++PD+KPL LWLNGGPGCSS+  G   E+GPF+   D + L LN  SWN+ +N+LF++SP GVG+SYSN SSD    GDK T  D L F
Sbjct:   30 DLVARLPGQP-NVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYN-TGDKSTVNDMLVF 156          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35
Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVN-EESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D V  LPGQ   VNF HY+GYV +  E+  +ALFYWF E  ++   +PLVLWLNGGPGCSSIAYG A+E+GPF +  +   L  N +SWN+ AN+LFL++PVGVGFSY+N S D+   GD+ TA DSL F
Sbjct:   38 DLVTGLPGQP-PVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAF 166          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.304e-35
Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D V KLPGQ   V F  ++GYV ++ ++GR+LFY+FVE  + P SKPL LWLNGGPGCSSI  G   E+GPF+   D + L  NP SWN+ +N+LF+DSP GVG+SYSNT+SD T  GD+ TA+D L F
Sbjct:   36 DLVTKLPGQP-EVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYT-TGDESTAKDMLVF 162          

HSP 2 Score: 23.483 bits (49), Expect = 5.304e-35
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  650 FLLKWLETFSQF 685
            F+L+WLE F QF
Sbjct:  162 FMLRWLEKFPQF 173          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.155e-35
Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            D + +LPGQ  +V F  Y GYV VN+ +GR L+Y+FVE ++  ++ PLV+W NGGPGCSS+  G  +E+GPF +  D KTL+ NPYSWN  AN+LFL++PVG GFSYSN+  +    GDK TAED+  F  +  +RF
Sbjct:   62 DLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLG-GAFKELGPFRVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPIN-GKQGDKATAEDNYMFLVNWLERF 196          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.161e-33
Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D V +LPGQ   V F  Y+GYV V+ ++GR+LFY++VE V+ PDSKPL LWLNGGPGCSSI  G   E+GPF+   D + L +N  SWN+ +++LF++SP GVG+SYSN SSD    GDK TA D L F
Sbjct:   31 DLVVRLPGQP-TVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYN-TGDKSTANDMLVF 157          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33
Identity = 74/129 (57.36%), Postives = 88/129 (68.22%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            DRV +LPGQ   V F  YSGYVTV+++  RALFY+F E   +P SKPLVLWLNGGPGCSS+  G   E GPF  +P    L  N +SWNQ AN+L+L++PVGVGFSYS  SS      DK TA D+L F
Sbjct:   30 DRVTRLPGQP-RVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVF 155          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.761e-33
Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 3
Query:  261 KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            + DR+ +LPGQ   V F  YSGYVT++E+  RALFY+  E    P SKPLVLWLNGGPGCSS+  G   E GPF  +P    L  N +SWNQ AN+L+L++PVGVGFSY+N SS      DK TA+D+L F
Sbjct:   30 RADRITRLPGQP-RVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGSILVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVF 157          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D V +LPGQ   V F  Y+GYV ++  +GR+LFY+FVE  + PD+KPL LWLNGGPGCSS+  G   E+GPF+     + L +N  SWN+ +N+LF+DSP GVG+SYSN SSD  A GDK  A D L F
Sbjct:   27 DLVVRLPGQP-KVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNA-GDKSAASDMLVF 153          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
HNLS_SORBI7.768e-3854.23P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP38_ARATH2.499e-3652.86Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP43_ARATH3.608e-3555.81Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP35_ARATH3.608e-3556.92Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP44_ARATH5.304e-3556.59Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP36_ARATH6.155e-3551.82Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP42_ARATH1.161e-3355.81Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP45_ARATH2.586e-3357.36Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP46_ARATH5.761e-3354.96Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP41_ARATH8.318e-3254.26Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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