FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32
Identity = 70/146 (47.95%), Postives = 93/146 (63.70%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDIT---ANGDKRTAEDSLNFY*SG*KRF 677
            ++ ++ D + KLPGQ   V+F  Y GYV VNE S R L+Y+FVE ++   S PLV+W NGGP CSS+  G   E+GPF +    + L+ NPYSWN  AN+LFL+SPV  GFSYS+   D+      GDK TAED+  F  +  +RF
Sbjct:   57 LSPKEKDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLG-GAFLELGPFRVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERF 201          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.219e-31
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            + KLPG        HYSGYVT+++E G+ L+Y+F+E  ++P   P+VLWLNGGPGCSS+  G   E GPF+ +  +K      L+LNPYSW++V+NI++LDSPVGVGFSYSN  SD    GD +TA DS  F
Sbjct:   35 ITKLPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMD-GFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDY-ITGDIKTAVDSHAF 164          

HSP 2 Score: 21.557 bits (44), Expect = 4.219e-31
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  650 FLLKWLETFSQF 685
            FLLKW + F +F
Sbjct:  164 FLLKWFQMFPEF 175          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31
Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLN 650
            V +LPG + N+    Y+GY+  N   GR LFYWF E + +P   PLV+W NGGPGCSS+  GEA E G F +  D  T+  NPYSWN+V+NIL+++ PVGVGFSYSN++ D     D + A D  N
Sbjct:   16 VTQLPGLSGNIGVKSYTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLG-GEASEHGLFLVNADGATITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNN 140          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKT---LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            +  LPG N      HY+GYV +++   + L+Y+FVE   +    P+VLWLNGGPGCSS+  G   E GPF+ +P +K    L+LNPYSW++V+NI++LDSPVGVGFSYSN ++D T + D +TA D+  F
Sbjct:   30 ITNLPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTD-DTKTASDTHTF 157          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSD-ITANGDKRTAED 641
            ++Q + D +  LPG  F  NF  YSGYV  N      + Y   E   +PD+ PL++W NGGPGCSS+  G  EE+GPF++  D +TLY NPY+WN  AN+L+L+SP+GVG+SY  T+     AN D+  A++
Sbjct:   16 LSQGEKDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLG-GLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQN 146          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28
Identity = 66/132 (50.00%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            V  +PG +  +   HY+GYVTV E+ GR LFY+ VE   DP   PLVLWLNGGPGCSS   G   E GPF+ +          L+LNPYSW++V+++++LDSP GVG SYS  +SD    GD +TA DS  F
Sbjct:   43 VKSVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYN-TGDLKTAADSHTF 172          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDK 626
            +A    D+V  LPG  F  +F HYSGY+    +  + L YW  E    P   PLVLWLNGGPGCSS+  G  EE+GPFH+K    ++Y N Y+WN+ AN+LFL+SP GVG+SYS T+ ++T + D+
Sbjct:   18 LAAPATDKVNDLPGLTFTPDFFHYSGYLRAWTD--KYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLD-GLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSYS-TNFNLTVSDDE 139          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDIT 611
            D +  LPG     +F  YSGY+       + L YWFVE  +DP S P+VLWLNGGPGCSS+  G   E GPF I+PD  TL  NPYSWN +AN+L+L+SP GVGFSYS+  S  T
Sbjct:   32 DEIRFLPGLAKQPSFRQYSGYL--KGSGSKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLD-GLLTEHGPFLIQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKSYAT 143          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27
Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 593
            D + +LPG     +F  YSGY+       + L YWFVE  +DP++ P+VLWLNGGPGCSS+  G   E GPF ++PD  TL  NPYSWN +AN+L+L+SP GVGFSYS+
Sbjct:   33 DEIQRLPGLAKQPSFRQYSGYL--KGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSD 138          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.052e-26
Identity = 60/126 (47.62%), Postives = 80/126 (63.49%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDS 644
            D +  LPG     +F  YSGY+  ++   +   YWFVE   DP + P+VLWLNGGPGCSS+  G   E GPF I+PD  TL  NPY+WN +AN+L+++SP GVGFSYS+    +T   D   AE++
Sbjct:   28 DEIDCLPGLAKQPSFRQYSGYLRASDS--KHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLD-GLLTEHGPFLIQPDGVTLEYNPYAWNLIANVLYIESPAGVGFSYSDDKMYVT--NDTEVAENN 148          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP37_ARATH8.318e-3247.95Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP20_ARATH4.219e-3152.27Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
NF314_NAEFO5.392e-3150.00Virulence-related protein Nf314 OS=Naegleria fowle... [more]
SCP21_ARATH2.959e-2949.23Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
YPP3_CAEEL1.124e-2845.45Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
CBP1_ORYSJ2.505e-2850.00Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
YSS2_CAEEL4.272e-2848.41Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
PPGB_BOVIN1.623e-2753.91Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
PPGB_HUMAN2.120e-2753.21Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
PPGB_MOUSE1.052e-2647.62Lysosomal protective protein OS=Mus musculus GN=Ct... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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