FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYS-NTSSDITAN 617
            LPG    + F   +GY+ V EE    +FY+F++   +P + PL+LWL+GGPGCSS   G   E GP   K +       TL    YSW +VANI++LD PVG GFSYS N  +DI ++
Sbjct:   30 LPGFEGPLPFELETGYIGVGEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFT-GLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSD 146          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 3
Query:  318 YSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 593
            +SGY+   +   +  FYWF E   DP + P++LWLNGGPGCSS   G   E+GP  I  D K ++ NPYSWN  A+++FL+ P+GVGFSY +
Sbjct:   94 WSGYMDYKDS--KHFFYWFFESRNDPANDPIILWLNGGPGCSSFT-GLLFELGPSSIGADMKPIH-NPYSWNNNASMIFLEQPLGVGFSYGD 181          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 54/128 (42.19%), Postives = 72/128 (56.25%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGD----KRTAE 638
            LPG    + F   +GY+ + E+     FY+F++   +P   PL++WLNGGPGCS +  G   E GP  +K         +L+   YSW ++ANI+FLD PVG GFSYS T  D T  GD    KRT E
Sbjct:   26 LPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHE 150          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYSNT 596
            V  LPG    + F   +GY+ V EE    LFY+F++   +P   PL+LWL GGPGCS+I+ G   E GP  +K D       +L    YSW + ++I+FLD PVG GFSYS T
Sbjct:   33 VKSLPGFEGQLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSAIS-GLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRT 144          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNT 596
            LPG    + F   +GY+ + EE    LFY+F++  ++P+  PL+LWL+GGPGCSS+  G   E GP  +K         +L    YSW ++ANI+FLD PVG GFSYS T
Sbjct:   29 LPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLT-GLLFENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRT 137          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 3
Query:  318 YSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS--SDITANGD 623
            Y+GY+ V ++  R LF+WF E   DP++ P+VLWLNGGPGCSS+  G   E+GP  I  +      NP+SWN  A+++FLD P+  GFS  + S    +TA  D
Sbjct:  589 YTGYLDVEDD--RHLFFWFFESRNDPENDPVVLWLNGGPGCSSLT-GLFMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFSNGDDSVLDTVTAGKD 689          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-----PDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITAN 617
            LPG    + F   +GY+ + EE     FY+F++  ++P   PL++WLNGGPGCS ++ G   E GP  +K         +L    YSW + ANI+FLD PVG GFSYS T  + T++
Sbjct:   28 LPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKR 629
            V  LPG    + F   +GYV++ E     LFY+FV+   +P++ PL++WL GGPGCSSI  G     GP   K DE       L L  +SW +VANIL+L++P G G+SY+ T     ++  K+
Sbjct:   27 VKSLPGFEGPLPFELETGYVSIGESGDVELFYYFVKSERNPENDPLMIWLTGGPGCSSIC-GLLFANGPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAPAGSGYSYAKTRRAFESSDTKQ 149          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYS-NTSSDITAN 617
            LPG    + F   +GY+ V ++    LFY+F++   +P+  PL++WL GGPGCSS + G   E GP   K +       TL    YSW +VANI++LD PVG GFSYS N  +DI ++
Sbjct:   31 LPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFS-GLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSD 147          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYSNT 596
            LPG   ++ F   +GY+ + EE    LFY+F++   +P   PL+LWL+GGPGCSSI+ G   E GP  +K D       +L    YSW + ++++FLD PVG GFSYS T
Sbjct:   35 LPGFEGSLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSIS-GLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRT 143          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP16_ARATH4.734e-1944.07Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
YBY9_YEAST6.183e-1948.91Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP8_ARATH6.183e-1942.19Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP1_ARATH8.076e-1944.25Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP13_ARATH8.076e-1944.55Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
CBPY_SCHPO8.076e-1945.19Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
SCP9_ARATH1.378e-1841.03Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP19_ARATH1.799e-1840.32Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP15_ARATH1.799e-1842.37Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP5_ARATH2.350e-1843.64Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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