FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 3
Query:  363 FYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITAN 617
            F+WF E  +DP++ PL +W+NGGPG SS+ +G   E GP  + PD  +  LNP+SWN   N+L+LD PV VG SY +T ++ T N
Sbjct:   85 FFWFFEARKDPENAPLSIWMNGGPGSSSM-FGMMTENGPCFVNPDSNSTRLNPHSWNNEVNMLYLDQPVQVGLSY-DTLANFTRN 167          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: KEX1_SCHPO (Carboxypeptidase kex1 OS=Schizosaccharomyces pombe GN=kex1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  225 GSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            G+  +   + +Q L  V   P +  +     ++G++   ++    LF+W  E V+       +LWLNGGPGCSS   G   E+GPF +  D  T  LNP  W+++ N+LF+D P+G G+SYS  + D  +N +K   + S+ F
Sbjct:   17 GNTLADSRIHEQYL--VKAFPNEPVDYEGRMHAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSS-EDGSLMEVGPFRL-DDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYS-LAKDFQSNNEKMANDFSIFF 154          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYSNT 596
            +  LPG    + F   +GY+ V E     LFY+F++   +P+  PL++WL GGP C++++   A EIGP   K +       +L    YSW +VA+I+FLD PVG G+SYS T
Sbjct:   29 ISYLPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALS-ALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTT 140          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 3
Query:  306 NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDI 608
            +  H++GY  + +  G ++FY+F E     D+ P+V+WL GGPGCSS       E GPF I  +  +L  N Y W+QV+N+L++D PVG GFSY+   SDI
Sbjct:   96 DLGHHAGYYKLPKSRGASMFYFFFESRNKKDA-PVVIWLTGGPGCSS-ELAVFYENGPFKITSN-MSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDI 193          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCPL2_DICDI (Serine carboxypeptidase S10 family member 2 OS=Dictyostelium discoideum GN=DDB_G0280105 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 51/134 (38.06%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFV---EDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKT---LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY 656
            V  LPG +  +    +SG +T NE S   LF+WF    E V +P   PL++WLNGGPGCSS+      E GP     D       Y+NP+SW+  AN+L++D P G G S+ + +  +  N      E + NFY
Sbjct:   74 VTDLPGLDNGI-LTSFSGLLTTNETSDGNLFFWFFPANETVINPMDAPLLVWLNGGPGCSSMD-SVFIETGPLRFIGDSDNSDKFYINPWSWHNSANMLYIDQPFGTGLSFVSDNDGLVTN----DLEINQNFY 201          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDE-----KTLYLNPYSWNQVANILFLDSPVGVGFSYS-NTSSDITAN 617
            LPG    + F   +GY+ V E     +FY+F++   +P+  PL+LWL+GGP CSS       E GP   K +E      +L    Y+W +VA+IL+LD PVG GFSYS N  +DI ++
Sbjct:   33 LPGFQGPLPFELETGYIGVGEAEKDQMFYYFIKSESNPEKDPLLLWLSGGPFCSSFT-ALIYENGPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSD 149          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  336 VNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITAN--GDKRTAEDSLN 650
            VN+      F+WF E  EDP + PL +WLNGGPG SS+  G  +E GP  +  D  +   NPYSWN   N+L++D P  VGFSY +  +++T N   D+ T  D  N
Sbjct:   74 VNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSY-DVPTNVTVNPINDEVTVADFSN 178          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 3
Query:  363 FYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITAN 617
            F+WF E  +DP++ PL +W+NGGPG SS+ +G   E GP  +  D  +  LNP+SWN   N+L++D PV VG SY +T ++ T N
Sbjct:   85 FFWFFEARKDPENAPLGIWMNGGPGSSSM-FGMMTENGPCFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSY-DTLANFTRN 167          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  321 SGYVTVNEESGRALFYWFVEDVED----PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITAN 617
            SGY+ V    G ++FY F E  E     PD+ PL++WL GGPGCSS+  G   E+GP+ +      L  NP +WN++  +LF+D+P+GVGFS + +  DI  N
Sbjct:   37 SGYLPVKPAPGSSMFYAFYEAQEPTTPLPDT-PLLVWLQGGPGCSSMI-GNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTN 137          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 3
Query:  258 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGD 623
            ++L  VG  PG    +N   Y+G++TVN+     LF+WF      P+  P+VLWL GGPG SS+ +G   E GP+ +     TL    + W    ++L++D+PVG GFS+++ +     N D
Sbjct:   58 RELSLVGPFPG----LNMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSM-FGLFVEHGPY-VVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNED 173          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCPB_NANOT2.598e-1748.24Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]
KEX1_SCHPO2.598e-1733.57Carboxypeptidase kex1 OS=Schizosaccharomyces pombe... [more]
SCP18_ARATH4.431e-1739.82Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP49_ARATH5.787e-1743.56Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
SCPL2_DICDI1.684e-1638.06Serine carboxypeptidase S10 family member 2 OS=Dic... [more]
SCP17_ARATH1.684e-1640.68Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SPCA_NANOT2.199e-1642.99Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SCPB_TRIRU4.899e-1645.88Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]
SCP50_ARATH6.399e-1642.72Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
CPVL_HUMAN8.357e-1636.07Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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