FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 3
Query:  363 FYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLN 650
            F+WF E  EDP + PL +WLNGGPG SS+  G  +E GP  +  D K+   N +SWN   N+L++D P  VGFSY     D+  N    T  D+++
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSY-----DVPTNITYSTINDTIS 172          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 3
Query:  243 DPVAQQKLDRVGKLPGQNFNV-NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            D    Q L+R   LPG    V +  H++GY  +       +FY+F E        P+V+WL GGPGCSS       E GPF I  +  +L  N + W++++NI+F+D P G GFSYS+   D T + +   + D  +F
Sbjct:   68 DVAPGQLLERRVTLPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFES-RGKKEDPVVIWLTGGPGCSS-ELAVFYENGPFTIA-NNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRD-TRHDETGVSNDLYDF 201          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  363 FYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSS 602
            F+WF E  EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY   ++
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTN 161          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  363 FYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSS 602
            F+WF E  EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY   ++
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTN 161          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 3
Query:  303 VNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGD 623
            +N   Y+G++TVN+     LF+WF      P+  P+VLWL GGPG SS+ +G   E GP+ +     TL    + W    ++L++D+PVG GFS+++ +     N D
Sbjct:   69 LNMRSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGFSSM-FGLFVEHGPY-VVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNED 173          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CPVL_MOUSE (Probable serine carboxypeptidase CPVL OS=Mus musculus GN=Cpvl PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  258 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 593
            Q+   V   PG N       Y+GY+TVN+     LF+WF      P+  P+VLWL GGPG SS+ +G   E GP+ I     T+    + W    ++L++D+PVG GFS+++
Sbjct:   60 QRKSMVSPFPGMNDK----SYAGYITVNQTYNSNLFFWFFPARMQPEDAPVVLWLQGGPGGSSM-FGLFVEHGPY-IITSNMTVVARDFPWTFTLSMLYIDNPVGTGFSFTD 165          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 3
Query:  306 NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGD 623
            +F H++GY  +       +FY+F E   +  + P+V+WL GGPGCSS       E GPF +  +  +L  N + W++ +N++++D PVG GFSY++  SD+  + D
Sbjct:   98 DFGHHAGYYKLPNSKAARMFYFFFESRTNK-ADPVVIWLTGGPGCSS-ELALFYENGPFTVS-NNSSLSWNEFGWDKASNLIYVDQPVGTGFSYTSDQSDLRHDED 200          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  306 NFAHYSGYVTVNEESGRALFYWFVEDVEDP-DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSD 605
            +  H++GY  +       LFY+F E      +  P+V+WL GGPGCSS       E GPFHI  D  +L  N + W+Q +N++++D P G GFSYS+   D
Sbjct:   13 DLGHHAGYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSS-ELALFYENGPFHIA-DNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRD 111          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  282 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFS 584
            +P  +F+V  + Y+G +        +LF+WF        S  + +WLNGGPGCSS+  G  +E GPF  +P       NPYSW  + N++++D P G GFS
Sbjct:   67 IPEVDFDVGES-YAGLLPNTPTGNSSLFFWFFPSQNPDASDEITIWLNGGPGCSSLD-GLLQENGPFLWQPGTYKPVPNPYSWTNLTNVVYIDQPAGTGFS 165          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: PEPF_ASPNG (Serine-type carboxypeptidase F OS=Aspergillus niger GN=pepF PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 48/130 (36.92%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  270 RVGKLPGQNFNVNFAHYSGYVTVNEES-GRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY 656
            RV  LP  +F++    YSG V + + +  R+LF+ F   + +P  + + +WLNGGPGCSS+     +E G F  +P       NPYSW  + N+L++D PVG GFS        TA  ++  AED + F+
Sbjct:   69 RVESLPDVHFDLG-EMYSGLVPIEKGNVSRSLFFVFQPTIGEPVDE-ITIWLNGGPGCSSLE-AFLQENGRFVWQPGTYQPVENPYSWVNLTNVLWVDQPVGTGFSLGVP----TATSEEEIAEDFVKFF 191          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SPCA_TRIRU7.075e-1542.71Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]
CBP3_HORVU9.240e-1535.51Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SPCA_TRIEQ1.207e-1447.50Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO1.207e-1447.50Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
CPVL_PONAB1.207e-1436.45Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
CPVL_MOUSE1.207e-1437.50Probable serine carboxypeptidase CPVL OS=Mus muscu... [more]
SCP48_ARATH1.576e-1435.85Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
CBPX_ORYSJ2.058e-1439.60Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
PEPS_ASPSA4.586e-1437.62Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
PEPF_ASPNG5.989e-1436.92Serine-type carboxypeptidase F OS=Aspergillus nige... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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