FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 49/142 (34.51%), Postives = 73/142 (51.41%), Query Frame = 3
Query:  231 AFSTDPVAQQKLDRVGKLPGQNFNV-NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            A + D    Q L+R   LPG    V +  H++GY  +       +FY+F E        P+V+WL GGPGCSS       E GPF I  +  +L  N + W++++NI+F+D   G GFSYS+   D T + +   + D  +F
Sbjct:   57 AGAEDVAPGQLLERRVTLPGLPEGVGDLGHHAGYYRLPNTHDARMFYFFFES-RGKKEDPVVIWLTGGPGCSS-ELAVFYENGPFTIA-NNMSLVWNKFGWDKISNIIFVDPATGTGFSYSSDDRD-TRHDEAGVSNDLYDF 194          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  264 LDRVGKLPGQNFNV-NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            L+R   LPG    V +  H++GY  +       +FY+  E        P+V+WL GGPGCSS       E GPF I  +  +L  N + W+ ++NI+F+D P G GFSYS+   D T + +   + D  +F
Sbjct:   68 LERRVTLPGLPQGVGDLGHHAGYYRLPNTHDARMFYFLFES-RGKKEDPVVIWLTGGPGCSS-ELAVFYENGPFTIS-NNMSLAWNKFGWDTISNIIFVDQPTGTGFSYSSDDRD-TRHDETGVSNDLYSF 194          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  306 NFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDK 626
            +F  ++G++TVNE      F+WF+E      + PLV++L GGPG +S  +    E GP+ +  D  TL     +WN    +L++D+PVG GFS++++    + N D+
Sbjct:   99 DFFTFTGFITVNETYNSNTFFWFLESQNGDKNSPLVIFLQGGPGGAS-TFSLFVETGPYELL-DNFTLVQREITWNSEFAMLYIDNPVGTGFSFTDSQEGYSNNEDE 203          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 3
Query:  318 YSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 593
            Y+GY+TVN+     LF+WF      P   P+VLWL GGPG SS+ +G   E GP+ I     T+    + W    ++L++D+PVG GFS+++
Sbjct:   76 YAGYITVNQTYNSNLFFWFFPARTQPADAPVVLWLQGGPGGSSM-FGLFVEHGPY-IITSNMTVLSRDFPWTFSLSMLYIDNPVGTGFSFTD 165          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 3
Query:  327 YVTVNEESGRALFYWFVEDVEDP----DSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS 599
            YVTV E+   A  +W++    +P       PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+
Sbjct:   42 YVTVRED---ARMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTT 128          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 3
Query:  327 YVTVNEESGRALFYWFVEDVEDP----DSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS 599
            YVTV ++   A  +W++    +P       PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+
Sbjct:   42 YVTVRKD---AHMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTT 128          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 3
Query:  327 YVTVNEESGRALFYWF---VEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS 599
            YVTV +++   +F+W        ++    PLV+WL GGPG SS  +G  EEIGP    +KP + T       W Q A++LF+D+PVG GFSY N S
Sbjct:   42 YVTVRKDA--YMFWWLYYATNSCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDSDLKPRKTT-------WLQAASLLFVDNPVGTGFSYVNGS 128          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 44/116 (37.93%), Postives = 59/116 (50.86%), Query Frame = 3
Query:  267 DRVGKLPGQNFNVNFAH-YSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDIT 611
            DR+  LP   F  +    YSGY+  N  S ++LFY +   V D  S+  ++WL GGPGC+    G   E GP  I     +  LNP SW   AN+L+LD P G G+S    +   T
Sbjct:   59 DRIKSLP--EFKGSLPELYSGYLEAN--SDKSLFYTYAPAVVD--SETFIVWLQGGPGCAG-TLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTT 167          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEE-------SGRALFYWFV--EDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSD 605
            VA + L  + ++P  + N+   H +G++ +  E       S    F+W     D      +PL++WLNGGPGCSS+  G   E GPF +  D K LYLN  SW    ++LF+D P G GFS      +
Sbjct:   31 VAYELLPGLSEVPDPS-NIPQMH-AGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMD-GALVESGPFRVNSDGK-LYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDE 154          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 3
Query:  324 GYVTVNEESGRALFYWFVED---VEDPDSK-PLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSY-SNTSSDITANGDKRTAED 641
            GYV V  ++   +F+W  +    VE+P    P++LWL GGPG S +  G  +E+GP    +KP   T       W + A++LF+DSPVG G+S+      D+    D+  A+D
Sbjct:   37 GYVEVRPKAH--MFWWHYKSPYRVENPSKPWPIILWLQGGPGASGVGIGNFQEVGPLDTFLKPRNST-------WLKKADLLFVDSPVGAGYSFVEGNQKDLYVKSDEEAAQD 140          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
CBP3_WHEAT7.822e-1434.51Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
CBP3_ORYSJ2.276e-1335.11Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]
CPVL_DICDI2.972e-1334.58Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
CPVL_RAT3.882e-1340.22Probable serine carboxypeptidase CPVL OS=Rattus no... [more]
RISC_RAT6.622e-1344.33Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_MOUSE2.516e-1243.30Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
RISC_HUMAN3.286e-1242.71Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
SXA2_SCHPO4.292e-1237.93Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
KEX1_YEAST7.321e-1235.16Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
SCP51_ARATH9.562e-1235.40Serine carboxypeptidase-like 51 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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