FC921389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: CSN6_PONAB (COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 50/208 (24.04%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYL 677 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ Sbjct: 42 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 243
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: CSN6_PIG (COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 50/208 (24.04%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYL 677 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ Sbjct: 37 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 238
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: CSN6_MOUSE (COP9 signalosome complex subunit 6 OS=Mus musculus GN=Cops6 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 50/208 (24.04%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYL 677 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ Sbjct: 38 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 239
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: CSN6_HUMAN (COP9 signalosome complex subunit 6 OS=Homo sapiens GN=COPS6 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 50/208 (24.04%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYL 677 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ Sbjct: 41 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 242
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: CSN6_BOVIN (COP9 signalosome complex subunit 6 OS=Bos taurus GN=COPS6 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 50/208 (24.04%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYL 677 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ Sbjct: 38 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYV 239
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: EI3F2_DROAN (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila ananassae GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 58/211 (27.49%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 63 KVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLXI 689 KV++ PLVL I+D+Y R KD +++G LLG S + ++N + V ++ D LD Y M + + +E V+GW+STG + + L +H + + P+ +++D K + T+ Y VE T+ +F VP E+A+ E + LR ++ + A +V L L + RE++ LDL + Sbjct: 10 KVVLQPLVLFQIIDSYERRPKDA-TQIIGTLLGRSNGKEITITNCFTV-LHKEHPDSARIDLDLGYANDMLELNQLTYPQEKVLGWFSTGKSVSRSALLLHDYYSRECSDGQPLHLLVDATLKGQRLSTRLYCGVEMGVPGGTK--GLMFSLVPLEMASDSAEMVA----LRLMQKQNLQPGAKQVGRILPELVQVVEATRELQLRLDLVL 212
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPOR (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus oryzae GN=AO090005001590 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11 Identity = 61/225 (27.11%), Postives = 107/225 (47.56%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLXIDEKLPLIT 713 V++HP L SI+D+ R D ++RV+G LLG+ S GT V++ ++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + + T+AY F+ VP EI E E+ G+E + RDV ++ + + ++ A++ + + + Y++ IDE+ P T Sbjct: 30 VVIHPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRTTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DVETRAYISAPVGVTAERAADSAAFIPVPYEIRYGETEKSGLESIAAARDV-ESRAANIFTDIEALERAVEEVLGMIDRVSKYVESVIDEEAPAST 248
BLAST of FC921389 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 61/225 (27.11%), Postives = 106/225 (47.11%), Query Frame = 3 Query: 66 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHSYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLXIDEKLPLIT 713 V++ P L SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + RD ++ + L ++ A++ + + + Y++ IDE+ P T Sbjct: 30 VVIQPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPHEIRYGETEKSGLEAIAAARDAEERA-ANLFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPAST 248 The following BLAST results are available for this feature:
BLAST of FC921389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921389 ID=FC921389; Name=FC921389; organism=Citrus clementina; type=EST; length=725bpback to top |