FC921411

Overview
NameFC921411
Unique NameFC921411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14304 contig Ccv1_Contig14304:1..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.218e-17
Identity = 50/157 (31.85%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTL 606
            R++LPPGP P PI GN L V  D   R   + +K +G I  + +G    V+VS+ ELAK+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   E E  +++  + ++   ++  +VLR+ L  + +  +
Sbjct:   30 RFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNM 186          

HSP 2 Score: 25.409 bits (54), Expect = 4.218e-17
Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  594 FHNITRLVFGKRFESEE 644
            ++N+ R++F +RFESEE
Sbjct:  183 YNNMYRIMFDRRFESEE 199          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 56/185 (30.27%), Postives = 100/185 (54.05%), Query Frame = 1
Query:  115 VYRLYPWL--------RYRLPPGPYPWPIIGNLLDVK-----PDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTLQD*CLGRD 630
            V+ L  WL         ++LPPGP+  PIIGNL  +      PD+     +  + YGP+M + +G    ++VS+ ++A +++K  D     R +  A   +  G TD+ +A YG ++ ++R++CTLEL S KR ++   IR++E + +I SI    +++ + + L   L S+  TT+     G++
Sbjct:   14 VFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQA--LQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSI---HSSAGSPIDLSGKLFSLLGTTVSRAAFGKE 193          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 5.484e-17
Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTL 606
            +++LPPGP P PI GN L V  D   R   + +K +G I  + +G    V+VS+ ELAK+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   E E  A++  + K+   + +  V+R+ L  + +  +
Sbjct:   30 KFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNM 186          

HSP 2 Score: 25.409 bits (54), Expect = 5.484e-17
Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  594 FHNITRLVFGKRFESEE 644
            ++N+ R++F +RFESEE
Sbjct:  183 YNNMYRIMFDRRFESEE 199          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 53/148 (35.81%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGS 588
            +LPPGP   PIIGNL  +     R F + S+ YGP+M +  G    V+ S  E A++VLK  D +   R +  A  + +    D+ +A YG  + ++R++  LELFS K+ +A R IREEE   ++  +  +S  +   + LRK L S
Sbjct:   27 KLPPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV-TESAQTQTLVDLRKALFS 173          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMI-----ASIFKDSTNSSNSLVLRKYLGSV 591
            LPPGP   PIIGNL  +     R   E SK YGP+MS+ +GS   V+ ++ E  + VLK  D +  +R      A I+    DLV++ Y  ++ +VR++  +EL++ KR ++ R IREEEV + +     A+  +++ N S  ++  K  GSV
Sbjct:   29 LPPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKIL--KMSGSV 179          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17
Identity = 43/128 (33.59%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASI 531
            LPPGP PWPIIGNL+ + P   +  A  ++ YGP+M + +G    V+ +++ +A Q LK  D   ++R        ++    DLV+A YG  +  +R++C++ LFS K  +  R +R++EV+ +  ++
Sbjct:   33 LPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRAL 160          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFK 537
            LPPGP PWPI+GNLL +       FAE ++ YG I ++ +G+   V+ S S  A ++LK  D+ L+ R+  ++  +       +VW+D    +  +R+VC  ELF+ K  E+   +RE++   M+  + K
Sbjct:   29 LPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 158          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFK 537
            LPPGP PWPI+GNLL +       FAE ++ YG I ++ +G+   V+ S S  A ++LK  D+ L+ R+  ++  +       +VW+D    +  +R+VC  ELF+ K  E+   +RE++   M+  + K
Sbjct:   28 LPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK 157          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 52/159 (32.70%), Postives = 88/159 (55.35%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYL----GSVAFTT 603
            +  LPPGP   PIIGNL  ++    +C  + SK +GP+M + +G +  V++S+SE A++ LK  D +  +R    A  + S+ G D+ +  YG  + ++R++   E FS K+ ++ + IREEE   MI  + K+  +  + + L K L     S+ F T
Sbjct:   29 KQNLPPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKL-KELASKQSPVDLSKILFGLTASIIFRT 186          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 50/161 (31.06%), Postives = 85/161 (52.80%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFTTLQD*CLGR 627
            +LPP P   PIIGNL  +     R   + SK YGP+M + +GS   ++ S+ E  + ++K  D   +NR + K    +  G  D+ ++ +G ++ ++R +  L L S KR ++ R  REEE   MI  + + S +SS++  LR     +A+  +    LG+
Sbjct:   24 KLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGK 184          
The following BLAST results are available for this feature:
BLAST of FC921411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
TCMO_GLYEC4.218e-1731.85Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71D8_SOYBN4.431e-1730.27Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
TCMO_SOYBN5.484e-1731.85Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C71BL_ARATH5.787e-1735.81Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR5.787e-1735.95Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
F3PH_PETHY9.872e-1733.59Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C80B2_ESCCA2.199e-1633.85(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA2.199e-1633.85(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71B4_ARATH2.199e-1632.70Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71A3_SOLME2.872e-1631.06Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC32104F09EF RVDevelopN Citrus clementina cDNA clone C32104F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921411 ID=FC921411; Name=FC921411; organism=Citrus clementina; type=EST; length=685bp
GAATGCAACCTATAAAGTTTACGGATGCAATCACATTATAATTCACCTAT
AATTTAATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCGATCATCA
TCTTCATCTTATTCGTTTACAGGCTGTATCCATGGCTGAGATACAGGCTC
CCACCAGGTCCATATCCATGGCCAATCATAGGAAACCTGTTGGATGTAAA
ACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTACGGTCCAA
TCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTCAAATTCA
GAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTAGCCAATAG
GCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACAGATCTTG
TATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGTATGCACC
CTTGAACTCTTCTCCCCAAAAAGGACGGAGGCCCTTAGGCCCATTAGAGA
AGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACTCCACCAATA
GCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGCTTTCACA
ACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAGAAGGGTAG
TGGATGGCCAGGACTGGAATTCAGGCAATTGTGCT
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