FC921412

Overview
NameFC921412
Unique NameFC921412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: FAS_BOVIN (Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 59/221 (26.70%), Postives = 97/221 (43.89%), Query Frame = 2
Query:   44 IPYAITNMGSALLAIDLGFM----GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVN---CDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT--TGIKINATKSMIGHCLGAAG 679
            + Y++     A+LA  L F     GP+ ++ TAC++S      A   I+RGE  + + GG    + P     F+    LS     P+   + +D   +G+   +    +++     A +    + A  L    N   C    +T P   G      I S  + AG+ PE + Y+ AH T T  GD  E+N I +    T  + ++I +TKS +GH   A+G
Sbjct:  128 VGYSMVGCQRAMLANRLSFFFDFKGPSITLDTACSSSLLALQRAYQAIQRGECAMAIVGGVNIRLKPNTSVQFMKLGMLS-----PEGTCKFFDASGNGYCRAKAVMAILLTKKSLARR----VYATILNAGTNTDGCKEKGVTFP--SGEAQEQLISSLYKPAGLDPETLEYVEAHGTGTKVGDPQELNGIVQALCGTRQSPLRIGSTKSNMGHPEPASG 337          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS27_DICDI (Probable polyketide synthase 27 OS=Dictyostelium discoideum GN=pks27 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 51/209 (24.40%), Postives = 91/209 (43.54%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-------KNTTGIKINATKSMIGH---CLGAA 676
            F G N++I +AC++S        N I+  ++++ + GG    + P     F     LS     P      +  D DG+V  EG G+++++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y  AH T T  GD  E+  I ++F        N   + + + KS IGH   C G A
Sbjct:  172 FRGENFTIDSACSSSLNAINCGYNSIKSNKSNVSVVGGVNFILDPNISKSFTQLNILS-----PTGKCHSFSSDADGYVRSEGVGIVILKKLKDAIKDSNNIYCVIKGSSSNIDGNYDKLNFYSPSKSSQYENMKLAIKST--NGQINESDIDYCEAHGTGTPTGDPIELEGISRLFSHNNNNNNNNKQVLVGSIKSNIGHTEACSGVA 373          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS21_DICDI (Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 51/210 (24.29%), Postives = 91/210 (43.33%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDP----RADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF---KNTTGIK---INATKSMIGHCLGAAG 679
            L+      GP+ +I TAC++S          I+ G ++L + GG    + P     F     LS++        +P+D + DG++  E  G+++++ L  A++ G  I       + N D   + D            S  I+ +L+ A +   +++++  H T T  GD  E+  +       K +T  K   I + KS IGH   A+G
Sbjct:  159 LSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGK-----CKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASG 363          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: LNKS_ASPTN (Lovastatin nonaketide synthase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=lovB PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 54/207 (26.09%), Postives = 89/207 (43.00%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGV----SPEEVNYINAHATSTLAGDLAEINAIKKVF-----------KNTTGIKINATKSMIGHCLGAAG 679
            GP+ +I TAC++S    + A   +R G++ + +A G    + P+    FV    LS  +  P   SR WD   DG+  GE    +V+++L  A++ G  I        VN D         +     + I+++   AG+    + +   +  AH T T AGD  E  AI   F                + + + K+++GH  G AG
Sbjct:  172 GPSMTIDTACSSSLVAVHLAVQQLRTGQSSMAIAAGANLILGPM---TFVLESKLSMLS--PSGRSRMWDAGADGYARGEAVCSVVLKTLSQALRDGDTIECVIRETGVNQDGRTTGITMPNHSAQEALIKATYAQAGLDITKAEDRCQFFEAHGTGTPAGDPQEAEAIATAFFGHEQVARSDGNERAPLFVGSAKTVVGHTEGTAG 373          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: LNKS_ASPTE (Lovastatin nonaketide synthase OS=Aspergillus terreus GN=lovB PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 54/207 (26.09%), Postives = 89/207 (43.00%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGV----SPEEVNYINAHATSTLAGDLAEINAIKKVF-----------KNTTGIKINATKSMIGHCLGAAG 679
            GP+ +I TAC++S    + A   +R G++ + +A G    + P+    FV    LS  +  P   SR WD   DG+  GE    +V+++L  A++ G  I        VN D         +     + I+++   AG+    + +   +  AH T T AGD  E  AI   F                + + + K+++GH  G AG
Sbjct:  172 GPSMTIDTACSSSLVAVHLAVQQLRTGQSSMAIAAGANLILGPM---TFVLESKLSMLS--PSGRSRMWDAGADGYARGEAVCSVVLKTLSQALRDGDTIECVIRETGVNQDGRTTGITMPNHSAQEALIKATYAQAGLDITKAEDRCQFFEAHGTGTPAGDPQEAEAIATAFFGHEQVARSDGNERAPLFVGSAKTVVGHTEGTAG 373          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS2_DICDI (Probable polyketide synthase 2 OS=Dictyostelium discoideum GN=pks2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 52/202 (25.74%), Postives = 91/202 (45.05%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN----TTGIKINATKSMIGHCLGAAG 679
            G + +I TAC++S    +     I  G++D  + GG    I P     F      S+         + +D+  DGFV  EGA VL+++SL  +++ G  I +   G + N D       Y      +    +    +S+  +  ++P ++++   H T T  GD  E+ A+  +FK+     + + I + KS IGH   A+G
Sbjct:  165 GTSLTIDTACSSSLNAVHLGYESIVNGKSDYSIVGGVNFIINPQQSRAFKYAMVTSKTGK-----CKAFDESADGFVRSEGAVVLILKSLSKSIEDGNQIYSIIKGSSSNVDGTLNKTNYFAPSKVSQSNNMQKAFDST--NGELTPNDISFFELHGTGTQIGDPIEVEAVSTLFKDIKTKESPLLIGSIKSNIGHLEPASG 359          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS18_DICDI (Probable polyketide synthase 18 OS=Dictyostelium discoideum GN=pks18 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 55/208 (26.44%), Postives = 90/208 (43.27%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDA------GVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG----------IKINATKSMIGHCLGAAG 679
            G + ++ TAC++S          I+ G ++L + GG    +       +     LS++     +    +D   DGFV  EGAGV +++SL+ ++  G  I     G + N D   + D +      SS    ++  A       V  +++ Y+ AH T T  GD  E+ AI +VFK              I I + KS +GH   A+G
Sbjct:  178 GESMTLDTACSSSLNAIILGYQSIKSGTSNLSIVGGVNLILDSNLSKSYSYLNMLSKKEGKCMS----FDSRADGFVRSEGAGVFILKSLKQSIIDGNNIYCVIKGASSNIDGNGLNDKQNFYSPSSSSQAENINRALSSTKGSVKIDDIVYVEAHGTGTPTGDPIELEAISRVFKTNNNDNNNQQHQNPILIGSFKSSVGHLESASG 381          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: KASB_STRCO (Actinorhodin polyketide putative beta-ketoacyl synthase 2 OS=Streptomyces coelicolor GN=SCO5088 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 58/202 (28.71%), Postives = 87/202 (43.07%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGL 685
            ++I  G  GP+ ++    A        A   IRRG   L+++GG ++A+ P G    +A   +S   D P  A  P+D+   G+V GEG  +LV+E    A  RG       L G  +   +          G+   I  +L DAG  PE+V+ + A        D AE  AI +VF    G+ +   K+  G      G L
Sbjct:  144 ISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATD-PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCAS--TFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVF-GREGVPVTVPKTTTGRLYSGGGPL 340          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: FAS_HUMAN (Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 60/221 (27.15%), Postives = 94/221 (42.53%), Query Frame = 2
Query:   44 IPYAITNMGSALLAIDLGFM----GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYH---MTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT--TGIKINATKSMIGHCLGAAG 679
            + Y++     A++A  L F     GP+ ++ TAC++S      A   I  G+    + GG    + P     F+    LS     P+   + +D   +G+   EG   +++     A +    + A  L    N D +    +T P  D       I S  + AGV+PE   YI AH T T  GD  E+N I +    T    + I +TKS +GH   A+G
Sbjct:  128 VGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLARR----VYATILNAGTNTDGFKEQGVTFPSGDIQ--EQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASG 337          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: FAS_RAT (Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 61/220 (27.73%), Postives = 93/220 (42.27%), Query Frame = 2
Query:   50 YAITNMGSALLAIDLGFM----GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVN---CDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKK---VFKNTTGIKINATKSMIGHCLGAAG 679
            Y++     A++A  L F     GP+ ++ TAC++S      A   IR GE    + GG    + P     F+    LS     P    R +D   +G+   E    +++     A +    + A  L    N   C    +T P   G      I S  +  GV+PE + YI AH T T  GD  E+N I +    F+ +  + I +TKS +GH   A+G
Sbjct:  130 YSMVGCQRAMMANRLSFFFDFKGPSIALDTACSSSLLALQNAYQAIRSGECPAAIVGGINLLLKPNTSVQFMKLGMLS-----PDGTCRSFDDSGNGYCRAEAVVAVLLTKKSLARR----VYATILNAGTNTDGCKEQGVTFP--SGEAQEQLIRSLYQPGGVAPESLEYIEAHGTGTKVGDPQELNGITRSLCAFRQSP-LLIGSTKSNMGHPEPASG 337          
The following BLAST results are available for this feature:
BLAST of FC921412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
FAS_BOVIN2.516e-1226.70Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=... [more]
PKS27_DICDI3.286e-1224.40Probable polyketide synthase 27 OS=Dictyostelium d... [more]
PKS21_DICDI3.286e-1224.29Probable polyketide synthase 21 OS=Dictyostelium d... [more]
LNKS_ASPTN3.286e-1226.09Lovastatin nonaketide synthase OS=Aspergillus terr... [more]
LNKS_ASPTE3.286e-1226.09Lovastatin nonaketide synthase OS=Aspergillus terr... [more]
PKS2_DICDI4.292e-1225.74Probable polyketide synthase 2 OS=Dictyostelium di... [more]
PKS18_DICDI4.292e-1226.44Probable polyketide synthase 18 OS=Dictyostelium d... [more]
KASB_STRCO5.606e-1228.71Actinorhodin polyketide putative beta-ketoacyl syn... [more]
FAS_HUMAN5.606e-1227.15Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 S... [more]
FAS_RAT1.249e-1127.73Fatty acid synthase OS=Rattus norvegicus GN=Fasn P... [more]

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Properties
Property NameValue
Genbank descriptionC32104F10EF RVDevelopN Citrus clementina cDNA clone C32104F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921412 ID=FC921412; Name=FC921412; organism=Citrus clementina; type=EST; length=686bp
GGCTCTAATAGAAAAAGGTCATAGAAAAATAACCCCGTTCTTCATTCCGT
ATGCTATAACAAACATGGGTTCTGCTTTGCTTGCAATTGACCTTGGCTTC
ATGGGTCCAAATTATTCAATTTCAACTGCCTGTGCAACCTCCAATTATTG
CTTTTATGCTGCCGCCAATCACATCCGTCGAGGAGAGGCTGATTTGATGC
TTGCTGGTGGAACTGAAGCAGCCATTATTCCTATTGGATTGGGTGGTTTT
GTTGCATGTAGAGCATTGTCTCAGAGAAATGATGACCCACAAACTGCTTC
TAGGCCATGGGACAAAGATCGGGATGGCTTTGTCATGGGAGAAGGTGCTG
GAGTATTGGTGATGGAGAGCTTGGAACATGCAATGAAACGAGGTGCACCG
ATCATAGCAGAGTACTTAGGGGGTGCTGTTAATTGTGATGCTTATCATAT
GACTGACCCCAGAGCTGATGGACTTGGAGTGTCTTCATGCATTGAGAGCA
GCCTTGAAGATGCTGGTGTGTCACCTGAGGAGGTCAACTACATAAATGCT
CACGCAACTTCCACTTTAGCTGGTGACCTGGCTGAGATAAATGCTATTAA
AAAGGTGTTCAAGAACACCACAGGGATCAAAATCAATGCCACGAAGTCTA
TGATAGGGCACTGCCTTGGTGCAGCTGGNGGTTTGG
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