FC921412

Overview
NameFC921412
Unique NameFC921412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS13_DICDI (Probable polyketide synthase 13 OS=Dictyostelium discoideum GN=pks13 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTAS-RPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDP----RADGLGVSSCIESSLEDAG--VSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIK-----INATKSMIGHCLGAAG 679
            F GP+ ++ TAC++S  C       IR G ++L +AGG    I P     F A  ++S  N   +T S + +D   DGF   EG+G++VM++L+ AM  G  I     G + N D   + D         L   + I+ +L+     V P++++Y   H T T  GD  E   I  VF + +  K     I + KS IGH    +G
Sbjct:  165 FRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPY----FTA--SISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSG 364          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: MSAS_PENPA (6-methylsalicylic acid synthase OS=Penicillium patulum PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 64/205 (31.22%), Postives = 92/205 (44.88%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTAS-RPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF----KNTTGIKINATKSMIGHCLGAAG 679
            ++  L  MGP+ ++  ACA+S    +     IR GE+ + + GG  A   P GL      R L +        S + +D D  G+  GEGAG LV++SL  A+     ++A   G AV  D         + +       ++L  A + P  V Y+ AHATST  GD  EI+AI  V+           I + K  IGH    AG
Sbjct:  187 ISYHLNLMGPSTAVDAACASSLVAIHHGVQAIRLGESKVAIVGGVNALCGP-GL-----TRVLDKAGAISSDGSCKSFDDDAHGYARGEGAGALVLKSLHRALLDHDNVLAVIKGSAVCQDGKTNGIMAPNSVAQQLAANNALSAANIDPHTVRYVEAHATSTPLGDPTEISAIASVYGADRPADDPCYIGSIKPNIGHLEAGAG 385          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS24_DICDI (Probable polyketide synthase 24 OS=Dictyostelium discoideum GN=pks24 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 55/202 (27.23%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPR----ADGLGVSSCIESSLEDAG--VSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT----TGIKINATKSMIGHCLGAAG 679
            G + ++ TAC++S        + I+  ++ + + GG    +       + +   LS+ N       + +D   DG+V  E  GV+V+++L+ A+K G  I     G + N D    +D         +  S  ++++++     V P +++Y+ AH T T  GD  E+  I KVFK+T    T + I + KS IGHC  A+G
Sbjct:  181 GNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNG----RCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASG 378          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS9_DICDI (Probable polyketide synthase 9/36 OS=Dictyostelium discoideum GN=pks9 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 59/205 (28.78%), Postives = 98/205 (47.80%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA--------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN---TTGIKINATKSMIGHCLGAAG 679
            F GP+ SI TAC++S        + I  G +++ + GG    +    +  +     LS+ +   +T    +D+  DGF  GE  GV+V+++L+ A+K G  I     G + N D         ++    ++    ++S  +S+ +   ++  ++ YI AH T T  GD  E  AI   FKN   +T I I + KS IGHC   +G
Sbjct:  170 FNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKT----FDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSIN--DIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSG 368          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS5_DICDI (Probable polyketide synthase 5 OS=Dictyostelium discoideum GN=pks5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 61/201 (30.35%), Postives = 92/201 (45.77%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTD------PRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN---TTGIKINATKSMIGHCLGAAG 679
            GP+ SI TAC++S        + I  G +++ + GG    I    + GF     LS+ +       + +D+  DGF  GE AGV+V++ L+ A++ G  I     G + N D   + D      P       +  +     +  +S  ++ YI AH T T  GD  E  AI   FKN   +T I I + KS IGHC   +G
Sbjct:  178 GPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGK----CKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSG 374          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKSJ_BACSU (Polyketide synthase pksJ OS=Bacillus subtilis GN=pksJ PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 61/228 (26.75%), Postives = 99/228 (43.42%), Query Frame = 2
Query:   50 YAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGG-----TEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIK-------------INATKSMIGHCLGAAG 679
            + I ++G   ++  L   GP+  + TAC++S    + A   ++ G+ ++ +AGG     TE A I     G ++               + +  D +G+V GEG G+++++ LE A + G  I     G A N      T    +    +  +  +   A + P  V YI AH T T  GD  EIN +K  FK  + ++             I + KS IGH   AAG
Sbjct: 3484 HMIPSVGPNRMSYFLNIHGPSEPVETACSSSLVAIHRAVTAMQNGDCEMAIAGGVNTILTEEAHISYSKAGMLSTDG----------RCKTFSADANGYVRGEGVGMVMLKKLEDAERDGNHIYGVIRGTAENHGGRANTLTSPNPKAQADLLVRAYRQADIDPSTVTYIEAHGTGTELGDPIEINGLKAAFKELSNMRGESQPDVPDHRCGIGSVKSNIGHLELAAG 3701          

HSP 2 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 63/224 (28.12%), Postives = 103/224 (45.98%), Query Frame = 2
Query:   41 FIPYAITNMGS--ALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGG----TEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGL-GVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG----IKINATKSMIGHCLGAAG 679
            ++ + +   G+   +++  LG  GP+Y +   C++S    ++A   +  GE+D  L GG    TE+ I      G+V    L+  +D    A   +D   DG + GEG  V++++    A+K G  I A   G  VN D        A  + G +  ++  +    V PE + Y+ AH T T  GD  E+ A+  V++  T       I + K+ IGH   AAG
Sbjct: 1900 YVSWVLAQSGTIPTMISHKLGLRGPSYFVHANCSSSLIGLHSAYKSLLSGESDYALVGGATLHTESNI------GYVHQPGLNFSSDGHIKA---FDASADGMIGGEGVAVVLLKKAADAVKDGDHIYALLRGIGVNNDGADKVGFYAPSVKGQADVVQQVMNQTKVQPESICYVEAHGTGTKLGDPIELAALTNVYRQYTNKTQFCGIGSVKTNIGHLDTAAG 2114          

HSP 3 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 53/215 (24.65%), Postives = 104/215 (48.37%), Query Frame = 2
Query:   56 ITNMGSALLAIDLG----FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTAS-RPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFK--NTTGIKINATKSMIGHCLGAAG 679
            I  +G   LA +L       GP+  + TAC+++      A   +R G+    + GG         L    + R   +R    + +S   +D+  DG V+GEG G++++++++ A++ G  I A     +VN D         +       ++ +L  +G  PE+++Y+ A+ + ++  DL E+ AI+ V++  +++ + + + K  IGH L A G
Sbjct: 4714 IVTVGQNYLAANLSQFFDVRGPSVVVDTACSSALVGMNMAIQALRGGDIQSAIVGGVSL------LSSDASHRLFDRRGILSKHSSFHVFDERADGVVLGEGVGMVMLKTVKQALEDGDIIYAVVKAASVNNDGRTAGPATPNLEAQKEVMKDALFKSGKKPEDISYLEANGSGSIVTDLLELKAIQSVYRSGHSSPLSLGSIKPNIGHPLCAEG 4922          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS6_DICDI (Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 58/205 (28.29%), Postives = 95/205 (46.34%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA--------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN---TTGIKINATKSMIGHCLGAAG 679
            F GP+ SI TAC++S        + I  G +D+ + GG    +       +     LS+ +       + +D+  DGF  GE  GV+V+++L+ A+K G  I     G + N D         ++    ++    ++S  +S+ +   ++  ++ YI AH T T  GD  E  AI   FKN   +  I I + KS IGHC   +G
Sbjct:  170 FNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGK----CKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSIN--DIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSG 368          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS8_DICDI (Probable polyketide synthase 8/35 OS=Dictyostelium discoideum GN=pks8 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 61/221 (27.60%), Postives = 103/221 (46.61%), Query Frame = 2
Query:   50 YAITNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA--------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN---TTGIKINATKSMIGHCLGAAG 679
            YA++N     ++    F GP+ SI TAC++S        + I  G +++ + GG    I+ +G+   +   +            + +D+  DGF  GE A ++V+++L+ A+K G  I     G + N D          +    ++    ++S  +S+  +  +S  ++ YI AH T T  GD  E  AI   FKN   +T I I + KS IGHC   +G
Sbjct:  158 YAVSNR----ISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNL-ILDVGM---IKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKST--NGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSG 368          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS26_DICDI (Probable polyketide synthase 26 OS=Dictyostelium discoideum GN=pks26 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 58/206 (28.16%), Postives = 94/206 (45.63%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA--------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT----TGIKINATKSMIGHCLGAAG 679
            F G + +I +AC++S          I +G+++L +AGG    +       F     LS+           +D+  DGFV GEGAG++V++SL+ A+K G  I     GG  N D         +     ++    +   +E S++   +   +++Y+  H T T  GD  E+  I KVFK        + I + KS IGH   A+G
Sbjct:  163 FHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGK-----CMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALE-SIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASG 362          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PHAS_MYCTU (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis GN=pks2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 57/208 (27.40%), Postives = 89/208 (42.79%), Query Frame = 2
Query:   62 NMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGL 685
            +M S  +A  +   GP  ++ TAC++     + A   +  GE+D+ LAGG    + P       A   LS     P    R +D   DGFV GEG  V+V++ L  A+  G  I+A   G + N D + +           +   ++L   GV    V  + AH   T  GD  E  ++ +V+       + + K+  GH    AG L
Sbjct:  173 SMASGRVAYAMRLHGPAITVDTACSSGLTAVHMACRSLHEGESDVALAGGVALMLEPRKAAAGSALGMLS-----PTGRCRAFDVAADGFVSGEGCAVVVLKRLPDALADGDRILAVIRGTSANQDGHTVNIATPSQPAQVAAYRAALAAGGVDAATVGMVEAHGPGTPIGDPIEYASVSEVYGVDGPCALASVKTNFGHTQSTAGVL 375          
The following BLAST results are available for this feature:
BLAST of FC921412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PKS13_DICDI2.199e-1631.07Probable polyketide synthase 13 OS=Dictyostelium d... [more]
MSAS_PENPA2.872e-1631.226-methylsalicylic acid synthase OS=Penicillium pat... [more]
PKS24_DICDI4.899e-1627.23Probable polyketide synthase 24 OS=Dictyostelium d... [more]
PKS9_DICDI6.399e-1628.78Probable polyketide synthase 9/36 OS=Dictyostelium... [more]
PKS5_DICDI6.399e-1630.35Probable polyketide synthase 5 OS=Dictyostelium di... [more]
PKSJ_BACSU1.425e-1526.75Polyketide synthase pksJ OS=Bacillus subtilis GN=p... [more]
PKS6_DICDI3.176e-1528.29Probable polyketide synthase 6 OS=Dictyostelium di... [more]
PKS8_DICDI5.417e-1527.60Probable polyketide synthase 8/35 OS=Dictyostelium... [more]
PKS26_DICDI7.075e-1528.16Probable polyketide synthase 26 OS=Dictyostelium d... [more]
PHAS_MYCTU7.075e-1527.40Phthioceranic/hydroxyphthioceranic acid synthase O... [more]

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Properties
Property NameValue
Genbank descriptionC32104F10EF RVDevelopN Citrus clementina cDNA clone C32104F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921412 ID=FC921412; Name=FC921412; organism=Citrus clementina; type=EST; length=686bp
GGCTCTAATAGAAAAAGGTCATAGAAAAATAACCCCGTTCTTCATTCCGT
ATGCTATAACAAACATGGGTTCTGCTTTGCTTGCAATTGACCTTGGCTTC
ATGGGTCCAAATTATTCAATTTCAACTGCCTGTGCAACCTCCAATTATTG
CTTTTATGCTGCCGCCAATCACATCCGTCGAGGAGAGGCTGATTTGATGC
TTGCTGGTGGAACTGAAGCAGCCATTATTCCTATTGGATTGGGTGGTTTT
GTTGCATGTAGAGCATTGTCTCAGAGAAATGATGACCCACAAACTGCTTC
TAGGCCATGGGACAAAGATCGGGATGGCTTTGTCATGGGAGAAGGTGCTG
GAGTATTGGTGATGGAGAGCTTGGAACATGCAATGAAACGAGGTGCACCG
ATCATAGCAGAGTACTTAGGGGGTGCTGTTAATTGTGATGCTTATCATAT
GACTGACCCCAGAGCTGATGGACTTGGAGTGTCTTCATGCATTGAGAGCA
GCCTTGAAGATGCTGGTGTGTCACCTGAGGAGGTCAACTACATAAATGCT
CACGCAACTTCCACTTTAGCTGGTGACCTGGCTGAGATAAATGCTATTAA
AAAGGTGTTCAAGAACACCACAGGGATCAAAATCAATGCCACGAAGTCTA
TGATAGGGCACTGCCTTGGTGCAGCTGGNGGTTTGG
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