FC921412

Overview
NameFC921412
Unique NameFC921412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS38_DICDI (Probable polyketide synthase 38 OS=Dictyostelium discoideum GN=pks38 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 53/215 (24.65%), Postives = 90/215 (41.86%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG-------IKINATKSMIGH---CLGAA 676
            +     F G N +I TAC++S+       N I+  ++++ + GG    + P     F     LS     P      +  D DGFV  EG G++V++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I + F N          + + + KS IGH   C G A
Sbjct:  164 IGFSFDFRGENLTIDTACSSSSNAINCGYNSIKSNKSNVSIVGGVNFILNPYISKSFTQLDMLS-----PTGKCHTFSSDADGFVRSEGVGIVVLKKLKDAIKDSNNIYCVIKGSSSNIDGNFDKLNFYSPSKLSQFENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRAFNNKASTTNNNKQVLVGSFKSNIGHTEACSGVA 371          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS28_DICDI (Probable polyketide synthase 28 OS=Dictyostelium discoideum GN=pks28 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 52/212 (24.53%), Postives = 93/212 (43.87%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF----KNTTGIKINATKSMIGH---CLGAA 676
            +  +  F G N++I +AC++S        N I+  ++++ + GG    + P     F     LS     P      +  D DGFV  EG G+++++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y  AH T T  GD  E+  I ++F     N   + + + KS IGH   C G A
Sbjct:  170 IGYNFDFRGENFTIDSACSSSLNAINCGYNSIKSNKSNVSVVGGVNFILDPHVSKSFTQLNMLS-----PTGKCHSFSSDADGFVRSEGVGIVILKKLKDAIKDSNNIYCVIKGSSSNVDGNYDKLNFYSPSKSSQYENMKLAIKST--NGQINESDIDYCEAHGTGTPTGDPIELEGISRLFDQNNNNKKQVLVGSIKSNIGHTEACSGVA 374          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS33_DICDI (Probable polyketide synthase 33 OS=Dictyostelium discoideum GN=pks33 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 55/224 (24.55%), Postives = 94/224 (41.96%), Query Frame = 2
Query:   59 TNMGSALLAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG---------IKINATKSMIGH---CLGAA 676
            TN  +  +     F G N +I TAC++S+       N I+  ++++ + GG    + P     F     LS     P      +  D DG+V  EG G++V++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I +VF N            + + + KS IGH   C G A
Sbjct:  172 TNSVANRIGYCFDFRGENLTIDTACSSSSNAINCGYNSIKSNKSNVSIVGGVNFILDPHISKSFTQLDMLS-----PTGKCHTFSSDADGYVRSEGVGIVVLKRLKDAIKDSNNIYCVIKGSSSNIDGNFDKLNFYSPSKSSQCENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRVFNNKASTTKTNNNKQVLVGSVKSNIGHTEACSGVA 388          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS31_DICDI (Probable polyketide synthase 31 OS=Dictyostelium discoideum GN=pks31 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 54/212 (25.47%), Postives = 89/212 (41.98%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF----------KNTTGIKINATKSMIGH---CLGAA 676
            F G N +I TAC++S+       N I+   +++ + GG    + P     F     LS     P      +  D DGFV  EG G++V++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I +VF           N   + + + KS IGH   C G A
Sbjct:  188 FRGENLTIDTACSSSSNAINCGYNSIKTNRSNVSIVGGVNIILDPHISKSFTQLDMLS-----PTGKCHTFSSDADGFVRSEGVGIVVLKKLKDAIKDSNNIYCVIKGSSSNIDGNFDKLNFYSPSKSSQCENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRVFNSAKIPSTTINNNKQVLVGSIKSNIGHLEACSGVA 392          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS29_DICDI (Probable polyketide synthase 29 OS=Dictyostelium discoideum GN=pks29 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 53/211 (25.12%), Postives = 90/211 (42.65%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG---------IKINATKSMIGH---CLGAA 676
            F G N +I TAC++S+       N I+  ++++ + GG    + P     F     LS     P      +  D DG+V  EG G++V++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I +VF N            + + + KS IGH   C G A
Sbjct:  189 FRGENLTIDTACSSSSNAINCGYNSIKSNKSNVSIVGGVNFLLDPHLSKSFTQLGLLS-----PTGRCHTFSSDADGYVRSEGVGIVVLKKLKDAIKDSNNIYCVIKGSSSNIDGNFDKLNFYSPSKSSQCENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRVFNNIASTTTNNNNKQVLVGSIKSNIGHTEACSGVA 392          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: KAS2_STRCN (Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces cyaneus GN=curB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 57/194 (29.38%), Postives = 93/194 (47.94%), Query Frame = 2
Query:   80 LAIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINA-IKKVFKNTTGIKINATKSMIG 658
            ++I  GF GP   +++  A        AA  + RG  D+++ G  EA + P  +   +    LS  ++DP  A RP+     GFV  EG  VL++E  + A +RGA + A   G A         D   +GL  +  I  +L++AG +PEE++ + A A      D AE  A +  + ++   + + A K+ IG
Sbjct:  157 ISIRSGFKGPCGVVASDEAGGLDAVAHAARVVERG-TDVVVVGAAEAPLAPYSMVCQLGYPELST-DEDPAIAYRPFTSAARGFVPAEGGAVLIVEEADRAHRRGAVVRATVAGHAATFTGASHWDQSREGL--AHAIHGALDEAGCAPEEIDVVFADAMGVPEADRAEALALVDALGRHAPRVPVTAPKTGIG 346          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS30_DICDI (Probable polyketide synthase 30 OS=Dictyostelium discoideum GN=pks30 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 54/210 (25.71%), Postives = 90/210 (42.86%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF--------KNTTGIKINATKSMIGH---CLGAA 676
            F G N +I TAC++S+       N I+  ++++ + GG    + P     F     LS     P      +  D DG+V  EG G++V++ L+ A+K    I     G + N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I +VF         N   + I + KS IGH   C G A
Sbjct:  187 FRGENLTIDTACSSSSNAINCGYNSIKSNKSNVSIVGGVNFILDPHISKSFTQLGLLS-----PTGRCHTFSSDADGYVRSEGVGIVVLKKLKDAIKDSNNIYCVIKGSSSNIDGNFDKLNFYSPSKSSQYENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRVFNKAPATTNNNHKQVLIGSIKSNIGHTEACSGVA 389          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS10_DICDI (Probable polyketide synthase 10 OS=Dictyostelium discoideum GN=pks10 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 50/200 (25.00%), Postives = 88/200 (44.00%), Query Frame = 2
Query:  104 GPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPR----ADGLGVSSCIESSLE--DAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNT--TGIKINATKSMIGHCLGAAG 679
            G + ++ TACA+S       A  I+ G++ L + GG    +    +  F     LS          RP+D   DG + GEG G +V++SL+ +++ G  I     G + N D    +D +       +  S  I+ +++  +  ++ ++++Y   H T T  GD  E   I   F  +    + I + K   GH   A+G
Sbjct:  175 GESVTLDTACASSGTAISMGAQCIKNGKSKLSIVGGVNLIVDTTNIKAFSYLNMLSTSG-----VCRPFDIGADGLLRGEGVGTIVLKSLKDSIRDGNKIYCIIKGSSYNVDGNGNSDKQNFYAPSSISQSDNIKLAIKSTNGSITCDDIDYFECHGTGTPTGDPIETKGISMAFNRSKQNPLLIGSLKGSSGHSEAASG 369          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: PKS34_DICDI (Probable polyketide synthase 34 OS=Dictyostelium discoideum GN=pks34 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 53/212 (25.00%), Postives = 89/212 (41.98%), Query Frame = 2
Query:   98 FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDA------YHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTG----------IKINATKSMIGH---CLGAA 676
            F G N +I TAC++S+       N I+  ++++ + GG    + P     F     LS     P      +  D DG+V  EG G++V++ L+ A+K    I     G   N D       ++     +    +   I+S+  +  ++  +++Y   H T T  GD  E+  I +VF N             + + + KS IGH   C G A
Sbjct:  189 FRGENLTIDTACSSSSNAINCGYNSIKSNKSNVSIVGGVNFILDPHISKSFTKLDMLS-----PTGRCHTFSSDADGYVRSEGVGIVVLKKLKDAIKDSNNIYCVIKGSNSNIDGNFDKLNFYSPSKSSQYENIKLAIKST--NGQINESDIDYCETHGTGTPTGDPIELEGISRVFNNKASTTTLINNNKQVLVGSIKSNIGHTEACSGVA 393          
BLAST of FC921412 vs. ExPASy Swiss-Prot
Match: FAS_CHICK (Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 61/219 (27.85%), Postives = 94/219 (42.92%), Query Frame = 2
Query:   50 YAITNMGSALLAIDLG----FMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYH---MTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF--KNTTGIKINATKSMIGHCLGAAG 679
            Y++T    A+LA  +     F GP+ +I TAC++S      A   IR G+    L GG    + P     F+    LS     P  A + +D   +G+   E   V+++     A +    + A  +    N D +    +T P   G      + S   + G+ P +V Y+ AH T T  GD  E+N I  VF       + I +TKS +GH   A+G
Sbjct:  130 YSMTGCQRAMLANRISYFYDFTGPSLTIDTACSSSLMALENAYKAIRHGQCSAALVGGVNILLKPNTSVQFMKLGMLS-----PDGACKAFDVSGNGYCRSEAVVVVLLTKKSMAKR----VYATIVNAGSNTDGFKEQGVTFP--SGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKVGDPQEVNGIVNVFCQCEREPLLIGSTKSNMGHPEPASG 337          
The following BLAST results are available for this feature:
BLAST of FC921412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PKS38_DICDI5.070e-1324.65Probable polyketide synthase 38 OS=Dictyostelium d... [more]
PKS28_DICDI5.070e-1324.53Probable polyketide synthase 28 OS=Dictyostelium d... [more]
PKS33_DICDI6.622e-1324.55Probable polyketide synthase 33 OS=Dictyostelium d... [more]
PKS31_DICDI8.648e-1325.47Probable polyketide synthase 31 OS=Dictyostelium d... [more]
PKS29_DICDI8.648e-1325.12Probable polyketide synthase 29 OS=Dictyostelium d... [more]
KAS2_STRCN8.648e-1329.38Putative polyketide beta-ketoacyl synthase 2 OS=St... [more]
PKS30_DICDI1.475e-1225.71Probable polyketide synthase 30 OS=Dictyostelium d... [more]
PKS10_DICDI1.927e-1225.00Probable polyketide synthase 10 OS=Dictyostelium d... [more]
PKS34_DICDI2.516e-1225.00Probable polyketide synthase 34 OS=Dictyostelium d... [more]
FAS_CHICK2.516e-1227.85Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC32104F10EF RVDevelopN Citrus clementina cDNA clone C32104F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921412 ID=FC921412; Name=FC921412; organism=Citrus clementina; type=EST; length=686bp
GGCTCTAATAGAAAAAGGTCATAGAAAAATAACCCCGTTCTTCATTCCGT
ATGCTATAACAAACATGGGTTCTGCTTTGCTTGCAATTGACCTTGGCTTC
ATGGGTCCAAATTATTCAATTTCAACTGCCTGTGCAACCTCCAATTATTG
CTTTTATGCTGCCGCCAATCACATCCGTCGAGGAGAGGCTGATTTGATGC
TTGCTGGTGGAACTGAAGCAGCCATTATTCCTATTGGATTGGGTGGTTTT
GTTGCATGTAGAGCATTGTCTCAGAGAAATGATGACCCACAAACTGCTTC
TAGGCCATGGGACAAAGATCGGGATGGCTTTGTCATGGGAGAAGGTGCTG
GAGTATTGGTGATGGAGAGCTTGGAACATGCAATGAAACGAGGTGCACCG
ATCATAGCAGAGTACTTAGGGGGTGCTGTTAATTGTGATGCTTATCATAT
GACTGACCCCAGAGCTGATGGACTTGGAGTGTCTTCATGCATTGAGAGCA
GCCTTGAAGATGCTGGTGTGTCACCTGAGGAGGTCAACTACATAAATGCT
CACGCAACTTCCACTTTAGCTGGTGACCTGGCTGAGATAAATGCTATTAA
AAAGGTGTTCAAGAACACCACAGGGATCAAAATCAATGCCACGAAGTCTA
TGATAGGGCACTGCCTTGGTGCAGCTGGNGGTTTGG
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