FC921414

Overview
NameFC921414
Unique NameFC921414
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.438e-38
Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME 459
            RDGVS+GQF  VL  EL  +      +     P +T I+ +KRHHTRLF  +   R +  ++GN+LPGTVVD+ +  PT +DFYLCSH G  GTSRP HY+ L DE+ F +D +Q L  NLC+ +ARCT+ VS+  P YYA LAA+R R Y E
Sbjct:  876 RDGVSDGQFDMVLNEELADMEN---KIMVGDYPKITVIVAKKRHHTRLFPKDRNQRQT--KNGNVLPGTVVDTDVVDPTAYDFYLCSHKGEVGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYE 1023          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.071e-36
Identity = 93/199 (46.73%), Postives = 113/199 (56.78%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGST-DGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594
            RDGVSE QF QVL  EL+ I KA   ++    P  T II QK HHT+LF  N  D        N+ PGTVVDS I HP ++DFY+ +HAG  GTSRP HYHVL DE  F  D +Q L  +L Y Y R T ++SVV P  YAHLAA +   +M+   +E   T  GSG   + S   V E     LP L  +V   MF+C
Sbjct:  700 RDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPD--------NVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMK--FEEFAETSSGSGGVPSSSGAVVPE-----LPRLHADVCSSMFFC 883          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO2_DROME (Protein argonaute-2 OS=Drosophila melanogaster GN=AGO2 PE=1 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 69/152 (45.39%), Postives = 96/152 (63.16%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM 456
            RDGVS+GQF ++   EL  I++AC  +    +P +  +IV KRHHTR F +   D +++++  N+ PGTVVD  I HP E  F++ SH  IQGT++P  Y+V+ +  N   D +Q LT NLC+ + RC RSVS   PAY AHL A R R Y+
Sbjct: 1036 RDGVSDGQFPKIKNEELRCIKQACDKV--GCKPKICCVIVVKRHHTRFFPSG--DVTTSNKFNNVDPGTVVDRTIVHPNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRVYL 1183          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL2_DANRE (Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21
Identity = 61/159 (38.36%), Postives = 85/159 (53.46%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM--EPDMQ 471
            RDGVS+GQ   V  YE+  I K C    PNY+P + FI+VQKR  T L++        +D  G   PGTV+D  + +    DFYL +H+  QG   P HY  +++  N T D +Q LT  +C+ Y     ++ V  P  YAH  AF +  Y+  EP +Q
Sbjct:  887 RDGVSDGQLKTVEHYEIPQILK-CFETIPNYEPKLAFIVVQKRISTTLYSYG------SDHFGTPSPGTVLDHTVTNRDWVDFYLMAHSIRQGCGLPTHYITVYNTANLTPDHLQRLTFKMCHLYWNWPGTIRVPAPCKYAHKLAFLSGQYLHSEPAIQ 1038          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL1_HUMAN (Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAF 438
            RDGV +GQ   ++ YE+        S+   Y P +T I+V+KR +TR FA       S  R  N LPGTV+D ++  P  +DF++ S A   G+  P HY+V++D +    D IQ LT  LC+ Y      + V  P  YAH  AF
Sbjct:  701 RDGVGDGQLKTLVNYEVPQFLDCLKSIGRGYNPRLTVIVVKKRVNTRFFAQ------SGGRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDNSGLKPDHIQRLTYKLCHIYYNWPGVIRVPAPCQYAHKLAF 840          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL1_MOUSE (Piwi-like protein 1 OS=Mus musculus GN=Piwil1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20
Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAF 438
            RDGV +GQ   ++ YE+        S+   Y P +T I+V+KR + R FA       S  R  N LPGTV+D ++  P  +DF++ S A   G+  P HY+V++D +    D IQ LT  LC+ Y      + V  P  YAH  AF
Sbjct:  702 RDGVGDGQLKTLVNYEVPQFLDCLKSVGRGYNPRLTVIVVKKRVNARFFAQ------SGGRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDSSGLKPDHIQRLTYKLCHVYYNWPGVIRVPAPCQYAHKLAF 841          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL2_ONCMY (Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwil2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM--EPDMQ 471
            RDGVS+GQ   V LYE+  + K C    PNY+P + FI+VQKR  T L++       S DR G   PGTV+D  + +    DFYL +H   QG   P     +++  N + D +Q LT  +C+ Y     ++ V  P  YAH  AF +  Y+  EP +Q
Sbjct:  895 RDGVSDGQLKTVELYEIPQLLK-CFETFPNYEPKLAFIVVQKRVSTNLYS------CSGDRFGTPPPGTVLDHTVTNREWVDFYLMAHHVRQGCGLPTRNISVYNTANLSPDHLQRLTFKMCHMYWNWPGTIRVPAPCKYAHKLAFLSGQYLHSEPAIQ 1046          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL1_DANRE (Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRA--RFYMEPDM 468
            RDGV +G    V+ YE+  I ++  ++  +Y+P ++ ++V+KR  +R FA          +  N  PGTV+D+++  P  +DF++ S A   G   P HY+V++D +    D +Q LT  LC+ Y      V V  P  YAH  AF      + EP+M
Sbjct:  698 RDGVGDGMLQSVVDYEVPQIMQSIKTMGQDYEPKLSVVVVKKRISSRFFAR------IDGKIANPPPGTVIDTEVTRPEWYDFFIVSQAVRFGCVAPTHYNVVFDNSGLKPDHMQRLTYKLCHMYYNWQGIVRVPAPCQYAHKLAFLVGQSIHKEPNM 849          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL1_CHICK (Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAF 438
            RDGV +GQ   ++ YE+        ++  +Y P +T I+V+KR  TR FA       +     N  PGTVVD ++  P  +DF++ S A   G   P HY+V++D +    D +Q LT  LC+ Y   +  + V  P  YAH  AF
Sbjct:  707 RDGVGDGQLNTLVNYEVPQFLDCLKTVGKDYNPRLTVIVVKKRVSTRFFAQ------AGGGLKNPPPGTVVDIEVTRPEWYDFFIVSQAVRNGCVAPTHYNVVYDTSKLKPDHVQRLTYKLCHMYYNWSGVIRVPAPCQYAHKLAF 846          
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PIWL4_MOUSE (Piwi-like protein 4 OS=Mus musculus GN=Piwil4 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 56/148 (37.84%), Postives = 77/148 (52.03%), Query Frame = 1
Query:    1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQP-PVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILP-GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAF 438
            RDGV  GQ   VL YE+  + K+      + +   ++ ++V+KR   RLFA       STD +    P GTVVDS+   P  +DFYL S    +GT  P HY+V++D+N    D +Q LT  LC+ Y      +SV  P  YAH   F
Sbjct:  687 RDGVGNGQLKAVLEYEVPQLLKSVTECGSDARSCRLSVVVVRKRCLLRLFA-------STDHTVQNPPLGTVVDSEATRPEWYDFYLISQTANRGTVSPTHYNVIYDDNALKPDHMQRLTFKLCHLYYNWQGLISVPAPCQYAHKLTF 827          
The following BLAST results are available for this feature:
BLAST of FC921414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
AGO3_ORYSJ6.438e-3850.33Protein argonaute 3 OS=Oryza sativa subsp. japonic... [more]
AGO16_ORYSJ2.071e-3646.73Protein argonaute 16 OS=Oryza sativa subsp. japoni... [more]
AGO2_DROME1.176e-3145.39Protein argonaute-2 OS=Drosophila melanogaster GN=... [more]
PIWL2_DANRE3.210e-2138.36Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 ... [more]
PIWL1_HUMAN9.339e-2137.67Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1... [more]
PIWL1_MOUSE3.549e-2036.99Piwi-like protein 1 OS=Mus musculus GN=Piwil1 PE=1... [more]
PIWL2_ONCMY1.033e-1937.74Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwi... [more]
PIWL1_DANRE1.142e-1832.91Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 ... [more]
PIWL1_CHICK4.338e-1834.93Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=... [more]
PIWL4_MOUSE2.812e-1737.84Piwi-like protein 4 OS=Mus musculus GN=Piwil4 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC32104F12EF RVDevelopN Citrus clementina cDNA clone C32104F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921414 ID=FC921414; Name=FC921414; organism=Citrus clementina; type=EST; length=719bp
AGGGATGGAGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTT
GGATGCGATTCGAAAGGCCTGTGCTTCTCTTGAGCCGAATTATCAGCCAC
CTGTGACTTTCATAATTGTACAAAAACGACACCATACTCGGTTATTCGCT
AATAACCACAGGGATAGGAGCAGCACAGATAGGAGTGGGAACATTCTGCC
TGGCACTGTGGTTGATTCTAAAATATGTCATCCAACAGAATTTGATTTTT
ACCTATGCAGCCATGCTGGTATTCAGGGCACAAGTCGACCGGCACATTAC
CATGTGCTATGGGATGAGAACAATTTTACAGCCGACGGAATCCAGTCTTT
GACAAACAATCTTTGTTACACATACGCAAGATGCACACGCTCTGTCTCTG
TGGTTCCTCCAGCATATTATGCACATTTAGCTGCTTTCCGCGCCCGTTTC
TACATGGAACCAGACATGCAGGAGAATGGCTCGACCGATGGCAGTGGTCA
TACCTCCACTAAGAGCACTCGGGCGGTAGGAGAGTCTGGTGTCCGGCCTT
TGCCAGCATTGAAAGAGAACGTGAAGAGGGTGATGTTTTATTGTTAAGAT
GGGGGATAAGGAGTTGATAGTAGCAGGGGAAGAGTAGTAGCTTGGGGATA
TCAATGCAGCAATCACGTTCATTTCCAAATTTNCTCTGTAATGTATGATC
ATGAAGATTTGGCATGCTG
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