FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTG_CEPAC (Actin, gamma OS=Cephalosporium acremonium GN=ACT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 53/202 (26.24%), Postives = 91/202 (45.05%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAIT 642 +V+DNG G+ KAG G+ P P+ + RP I + ++ S + PI+ G + N D IW H F TE S + ++VFE FN + +V+ +++ LY + R +V+D G TH P+++ F + +A+ R+D+ G+ LT+YL ++++ R T Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQ-AVLSLYASGRTT---------GIVLDSGDGVTHVVPIYEGFALPHAIARVDMAGRDLTDYLMKILAERGYT 199
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_HISCA (Actin OS=Histriculus cavicola PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 61/203 (30.05%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHR--------PIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTE-PLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 V+DNG G++KAG GE P P+ + RP + I SA+E L A + PI+ G + + D IW H F TE PL + ++ T +++FE FN +L+VA +++ LY A R +V D G TH P+++ F++ +AV RI L G+ LT ++ +L++ R Sbjct: 8 VIDNGSGVVKAGFSGEDAPRAVYPSIVGRPKNVSALIGVD----SASEYLGDEAQQKRGVLKIFYPIEHGIVKDWDDMEKIWNHTFYVELRVSPDEHPVLLTEAPLNPKVNREKMT-QIMFETFNVPALYVAIQ-AVLSLYSAGRTT---------GIVCDAGDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLTER 195
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTC_RAT (Actin, alpha cardiac muscle 1 OS=Rattus norvegicus GN=Actc1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTC_MOUSE (Actin, alpha cardiac muscle 1 OS=Mus musculus GN=Actc1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTC_HUMAN (Actin, alpha cardiac muscle 1 OS=Homo sapiens GN=ACTC1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTC_CHICK (Actin, alpha cardiac muscle 1 OS=Gallus gallus GN=ACTC1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTC_BOVIN (Actin, alpha cardiac muscle 1 OS=Bos taurus GN=ACTC1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTA_CHICK (Actin, aortic smooth muscle OS=Gallus gallus GN=ACTA2 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 54/204 (26.47%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E S +V DNG GL KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL +++S R Sbjct: 5 EDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILSER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT2_XENTR (Actin, alpha sarcomeric/cardiac OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/204 (25.49%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E + +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT1_NAEGR (Actin-1 OS=Naegleria gruberi GN=ACT1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 53/204 (25.98%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 34 EMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 E +V+DNG G+ KAG GE P P+ + RPL + A ++ S A+ PI+ G + N D IW H F TE + + +++FE F +++VA +++ LY + R +V+D G +H P+++ + + +A+ R+DL G+ LT+YL +++ R Sbjct: 2 EEHQALVIDNGSGMCKAGFAGEDAPRAVFPSLIGRPLQRSIMVGMGNKDAYVGDEAMSKKGILALKYPIEHGIITNWDDMEKIWHHTFYNELRVGPEEHGVLLTEAPLNPKANREKMTQIMFETFRVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMER 195 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |