FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT24_DICDI (Putative actin-24 OS=Dictyostelium discoideum GN=act24 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 46/196 (23.47%), Postives = 87/196 (44.39%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAA----VHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELV 624 +V+DNG G+ KAG G P P+ + RP + + + ++ S + P++RG + N + +IW H F TEP + + +++FE FN +++VA +++ LY + R +++D G ++ PV++ T ++ R+ L G LT+Y+ L+ Sbjct: 9 IVIDNGSGMCKAGFAGYDAPHAVFPSIVGRPRHTGVMVGMGQKDSYIGDEAQSKRDILNLKFPVERGIITNWNDMEEIWHHTFYNELRVAPEEHPVLLTEPPLNSKANREKMPQIMFETFNTPAMYVA-IQAVLSLYASGR---------ATGVILDSGDGVSYTVPVYEGNTFPLSITRLHLAGGDLTDYMSRLL 194
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 53/213 (24.88%), Postives = 83/213 (38.97%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCM----------------YRPLSSKKFIHPSP--TAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 VV+DNG G K G+ G +P IP + + P ++ K I A E+ + P+ G + N W H TEP P + T E++FE FN L++A L AS + +T V+D G TH PV + + + ++K I L G+ +TN++ +L+ R Sbjct: 9 VVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLDFFIGDEAYENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAEIMFETFNVPGLYIAVQAVLA--LAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRER 219
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/203 (24.63%), Postives = 91/203 (44.83%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSP----TAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAITL 645 VV+DNG G+IKAG G R+P PN + R SK S A E + ++ P++RG + + +W H++ TEP + ++ E+ FE+ + +++ +++ L+ A LV++ G T P+F+ + +++ VK++++ G LT+YL L+ I L Sbjct: 8 VVIDNGSGMIKAGLAGTREPQFVYPNILGR---SKGHTADSRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMS-AQAVLALFAAG---------FTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIML 197
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_RAT (Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT-----------SAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 V+D G G K G+ G +P IP+C+ S+K +DL + A PI G + + DL + TEP P + T E++FE FN L++A L + R G T V+D G TH PV + + + +K I + G+ +T ++++L+ R + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_PONAB (Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT-----------SAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 V+D G G K G+ G +P IP+C+ S+K +DL + A PI G + + DL + TEP P + T E++FE FN L++A L + R G T V+D G TH PV + + + +K I + G+ +T ++++L+ R + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_MOUSE (Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT-----------SAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 V+D G G K G+ G +P IP+C+ S+K +DL + A PI G + + DL + TEP P + T E++FE FN L++A L + R G T V+D G TH PV + + + +K I + G+ +T ++++L+ R + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_HUMAN (Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT-----------SAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 V+D G G K G+ G +P IP+C+ S+K +DL + A PI G + + DL + TEP P + T E++FE FN L++A L + R G T V+D G TH PV + + + +K I + G+ +T ++++L+ R + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP3_BOVIN (Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 52 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT-----------SAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 V+D G G K G+ G +P IP+C+ S+K +DL + A PI G + + DL + TEP P + T E++FE FN L++A L + R G T V+D G TH PV + + + +K I + G+ +T ++++L+ R + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT1_SOYBN (Actin-1 OS=Glycine max GN=SAC1 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 50/202 (24.75%), Postives = 89/202 (44.06%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHR-------PIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG G++KAG G+ P P+ + RP + + A ++ A V R PI+ G + N D IW H F TE + ++FE F ++ VA +++ LY + R +V+D G +H P+++ + + +A+ R+DL G+ LT++L ++++ R Sbjct: 10 LVCDNGTGMVKAGLAGDDAPRAVFPSIVGRPRHTXVVVGMGQKDAYVGDE---AQVQRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKYNREKMXRVMFETFGAPAVCVA-VLAVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTQR 198 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |