FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_YEAST (Actin OS=Saccharomyces cerevisiae GN=ACT1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 53/199 (26.63%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE S + +++FE FN + +V+ +++ LY + R +V+D G TH P++ F++ +A+ RIDL G+ LT+YL +++S R Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQ-AVLSLYSSGRTT---------GIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSER 196
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_SACBA (Actin OS=Saccharomyces bayanus GN=ACT1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 53/199 (26.63%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE S + +++FE FN + +V+ +++ LY + R +V+D G TH P++ F++ +A+ RIDL G+ LT+YL +++S R Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQ-AVLSLYSSGRTT---------GIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSER 196
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_CANGA (Actin OS=Candida glabrata GN=ACT1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 53/199 (26.63%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE S + +++FE FN + +V+ +++ LY + R +V+D G TH P++ F++ +A+ RIDL G+ LT+YL +++S R Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQ-AVLSLYSSGRTT---------GIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSER 196
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_OREMO (Actin, alpha skeletal muscle OS=Oreochromis mossambicus GN=acta1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH PV++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_CYPCA (Actin, alpha skeletal muscle OS=Cyprinus carpio GN=acta1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH PV++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_CARAU (Actin, alpha skeletal muscle OS=Carassius auratus GN=acta1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH PV++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTSA_TAKRU (Actin, alpha skeletal muscle A OS=Takifugu rubripes GN=acta1a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 52/199 (26.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH PV++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTM_MOLOC (Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 52/207 (25.12%), Postives = 92/207 (44.44%), Query Frame = 1 Query: 25 SSSEMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 S E +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G +H P+++ + + +A+ R+DL G+ LT YL ++++ R Sbjct: 3 SEEEDQTAIVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRIAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGISHNVPIYEGYALPHAIARMDLAGRDLTEYLTKILTER 199
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT3_XENLA (Actin, alpha sarcomeric/skeletal OS=Xenopus laevis PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 51/199 (25.63%), Postives = 92/199 (46.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A++R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIQRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_EXODE (Actin OS=Exophiala dermatitidis PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 52/199 (26.13%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP I + ++ S + PI+ G + N D IW H F TE S + ++VFE FN + +V+ +++ LY + R +V+D G TH P+++ F + +A+ R+D+ G+ LT+YL ++++ R Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQ-AVLSLYASGRTT---------GIVLDSGDGVTHVVPIYEGFALPHAISRVDMAGRDLTDYLMKILAER 196 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |