FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_ASPOR (Actin OS=Aspergillus oryzae GN=act1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP + + ++ S ++H PI+ G + N D IW H + TE S + +++FE FN + +V+ +++ LY + R +V+D G TH P+++ F++ +A+ R+DL G+ LT YL +++ R Sbjct: 8 IVIDNGSGMCKAGFAGDDAPRAVFPSLIGRPRHHGIIVGMGQKDSYVGDEAQSKRGVLSLHYPIEHGIVNNWDDMEKIWHHTYFNELRVASEEHPVLLTEAPINPKSNREKMTQIMFETFNVPAFYVSIQ-AVLSLYASGRTT---------GIVLDSGDGVTHVVPIYEGFSMPHAIARMDLAGRDLTEYLVRILAER 196
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_ASHGO (Actin OS=Ashbya gossypii GN=ACT1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 52/199 (26.13%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V+DNG G+ KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE S + +++FE FN + +V+ +++ LY + R +V+D G TH P++ F++ +A+ RIDL G+ +T+YL +++S R Sbjct: 9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQ-AVLSLYSSGRTT---------GIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDMTDYLMKILSER 197
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_RAT (Actin, alpha skeletal muscle OS=Rattus norvegicus GN=Acta1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_RABIT (Actin, alpha skeletal muscle OS=Oryctolagus cuniculus GN=ACTA1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_PONAB (Actin, alpha skeletal muscle OS=Pongo abelii GN=ACTA1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_PIG (Actin, alpha skeletal muscle OS=Sus scrofa GN=ACTA1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_MOUSE (Actin, alpha skeletal muscle OS=Mus musculus GN=Acta1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_HUMAN (Actin, alpha skeletal muscle OS=Homo sapiens GN=ACTA1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_CHICK (Actin, alpha skeletal muscle OS=Gallus gallus GN=ACTA1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_BOVIN (Actin, alpha skeletal muscle OS=Bos taurus GN=ACTA1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |