FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT2_OXYNO (Actin, cytoplasmic OS=Oxytricha nova GN=MIC-ACT-1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAA----SATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVS 627 VV+DNG G++KAG GE P P+ + RP + I + A + + PI+ G + + + IW H F TE + + +++FE FN +L+VA +++ LY A R +V D G TH P+++ F++ +AV RI L G+ LT ++ +L++ Sbjct: 7 VVVDNGSGVVKAGFSGEDAPRAVFPSIIGRPKNVSALIGVDSASEYIGDEAQQKRGVLKIFYPIEHGIIKDWEDMEKIWNHTFYVELRVQPDEHPVLLTEAPLNPKTNREKMTQIMFETFNVPALYVAIQ-AVLSLYSAGRTT---------GIVCDAGDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLT 193
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT1_TRYBB (Actin A OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 47/209 (22.49%), Postives = 95/209 (45.45%), Query Frame = 1 Query: 28 SSEMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAIT 642 S E +V DNG G++K+G G+ P P+ + RP + + + + ++ + A+ PI+ G + N D +W H F TE + +++FE F +++V +++ LY + R +V+D G TH P+++ +++ +A++R+D+ G+ LT YL +++ + +T Sbjct: 2 SDEEQTAIVCDNGSGMVKSGFSGDDAPRHVFPSIVGRPKNEQAMMGSANKKLFVGDEAQAKRGVLALKYPIEHGIVTNWDDMEKVWHHTFYNELRVNPESHNVLLTEAPMNPKQNREKMTQIMFETFGVPAMYVGIQ-AVLSLYSSGRTT---------GIVLDAGDGVTHTVPIYEGYSLPHAIRRVDMAGRDLTEYLMKILMHTGMT 200
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT1_OXYNO (Actin, cytoplasmic OS=Oxytricha nova PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAA----SATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVS 627 VV+DNG G++KAG GE P P+ + RP + I + A + + PI+ G + + + IW H F TE + + +++FE FN +L+VA +++ LY A R +V D G TH P+++ F++ +AV RI L G+ LT ++ +L++ Sbjct: 7 VVVDNGSGVVKAGFSGEDAPRAVFPSIIGRPKNVSALIGVDSASEYIGDEAQQKRGVLKIFYPIEHGIIKDWEDMEKIWNHTFYVELRVQPDEHPVLLTEAPLNPKTNREKMTQIMFETFNVPALYVAIQ-AVLSLYSAGRTT---------GIVCDAGDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLT 193
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTS_ATRMM (Actin, alpha skeletal muscle OS=Atractaspis microlepidota microlepidota GN=ACTA1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLPLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTSB_TAKRU (Actin, alpha skeletal muscle B OS=Takifugu rubripes GN=acta1b PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15 Identity = 51/199 (25.63%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG GL+KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACTM_CIOSA (Actin, muscle OS=Ciona savignyi PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15 Identity = 51/206 (24.76%), Postives = 93/206 (45.15%), Query Frame = 1 Query: 28 SSEMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 S E +V DNG GL+K+G G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G +H P+++ + + +A+ R+DL G+ LT+YL ++++ R Sbjct: 4 SEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVMDAGDGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTER 199
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15 Identity = 51/199 (25.63%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG G++KAG G+ P P+ + RP + + A ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G +H P+++ F++ +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15 Identity = 51/199 (25.63%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG G++KAG G+ P P+ + RP + + A ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G +H P+++ F++ +A+ R+DL G+ LT+YL ++++ R Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_VOLCA (Actin OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14 Identity = 50/199 (25.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +V DNG G++KAG G+ P P+ + RP + + + ++ S + PI+ G + N D IW H F TE + + +++FE FN +++VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL +++ R Sbjct: 10 LVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMER 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ACT_SCHPO (Actin OS=Schizosaccharomyces pombe GN=act1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14 Identity = 52/202 (25.74%), Postives = 90/202 (44.55%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAIT 642 +V+DNG G+ KAG G+ P P+ + RP + + ++ S + PI+ G + N D IW H F TE S + +++FE FN + +VA +++ LY + R +V+D G TH P+++ + + +A+ R+DL G+ LT+YL +++ R T Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQ-AVLSLYASGRTT---------GIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYT 199 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |