FC921421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H4_TETTH (Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 1 Query: 175 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 1 Query: 175 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = 1 Query: 175 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H42_BLEJA (Histone H4 (Fragment) OS=Blepharisma japonicum GN=H4 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28 Identity = 61/75 (81.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 163 VLRDNIQGITKPAIRRLARRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 384 V+R+N QGITKPAIRRLARRGGVKR +SGL+Y+ETR VLK+FLE+V+RDAVTYTEHA+R+TVTA+DVVYALKRQG Sbjct: 15 VIRENNQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLESVVRDAVTYTEHAKRETVTALDVVYALKRQG 89
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28 Identity = 60/74 (81.08%), Postives = 69/74 (93.24%), Query Frame = 1 Query: 169 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 +D ++GITKPAIRRLARRGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRT Sbjct: 40 QDALKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRT 113
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26 Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 1 Query: 169 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 +++I GITKPAIRRLARRGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRT Sbjct: 29 KEHINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRT 102
BLAST of FC921421 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25 Identity = 62/76 (81.58%), Postives = 64/76 (84.21%), Query Frame = 1 Query: 163 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 390 VL DNIQGITK IRRLAR GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRT Sbjct: 22 VLSDNIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRT 97 The following BLAST results are available for this feature:
BLAST of FC921421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921421 ID=FC921421; Name=FC921421; organism=Citrus clementina; type=EST; length=622bpback to top |