FC921423

Overview
NameFC921423
Unique NameFC921423
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.581e-40
Identity = 92/199 (46.23%), Postives = 122/199 (61.31%), Query Frame = 1
Query:   88 YHAIFNFGDSLSDTGNFL-VSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            + +I +FGDS++DTGN L +S     P+    PYGETFF H TGR SDGRL+IDF+AE   LPY+PPY     G NF+ GVNFAVA ATAL S+ F ++K G     N SL VQ+  FK+   ++C    DC      +L  +GEIG NDYN+  F    +++++  VPLV+  I++A   LI  G    +VPG FP G
Sbjct:   34 FESIISFGDSIADTGNLLGLSDHNNLPMSAFPPYGETFFHHPTGRFSDGRLIIDFIAEFLGLPYVPPYFGSTNG-NFEKGVNFAVASATALESS-FLEEK-GYHCPHNFSLGVQLKIFKQSLPNLCGLPSDCRDMIGNALILMGEIGANDYNFPFFQLRPLDEVKELVPLVISTISSAITELIGMGGRTFLVPGGFPLG 229          

HSP 2 Score: 24.2534 bits (51), Expect = 2.581e-40
Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  669 FPIGCSAVYLTLFRS 713
            FP+GCS  +LTL ++
Sbjct:  226 FPLGCSVAFLTLHQT 240          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL12_ARATH (GDSL esterase/lipase At1g28660 OS=Arabidopsis thaliana GN=At1g28660 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.716e-39
Identity = 99/238 (41.60%), Postives = 144/238 (60.50%), Query Frame = 1
Query:   16 LAMKFFHLVFALCLLRSVSTSPLK-YHAIFNFGDSLSDTGNFL-VSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSIC-STRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG-ARLCT*PYSEAS 717
            L   F  ++++  ++ + S S  + + +I +FGDS++DTGN L +S     P     PYGE+FF   +GR SDGRL+IDF+AE   LPY+PPY    +  +F+ G+NFAV GATAL  A F  + I S  +TN SL VQ+D FK++  ++C S+ +DC      SL  +GEIGGND+ Y +  G SIN+ +    L++KAI++A   LI  G    +VPG FP+G +  C   Y  A+
Sbjct:    8 LISSFLLVLYSTTIIVASSESRCRRFTSIISFGDSIADTGNILHLSDVNHLPQTAFFPYGESFFHPPSGRASDGRLIIDFIAEFLGLPYVPPYFG-SQNVSFEQGINFAVYGATALDRAYFVAKGIESD-FTNVSLGVQLDIFKQILPNLCASSSRDCREMLGDSLILMGEIGGNDFFYPSSEGKSINETKLQ-DLIIKAISSAIVDLIALGGKTFLVPGGFPAGCSAACLTQYQNAT 242          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL57_ARATH (GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31
Identity = 89/247 (36.03%), Postives = 132/247 (53.44%), Query Frame = 1
Query:   46 ALCLLRSVSTSPL------KYHAIFNFGDSLSDTGNFLVS-GALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQ-----NFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGARLCT*PYSEASRNGLRSNGCLK 750
            A+ L  ++ST+         ++ I+ FGDS +DTGN     G   F  +   PYG TFFR  T R SDGRL IDF+AE+  LP+LPPYL+LK           HGVNFAV+G+T ++ A F K  +   + T  S+  ++ WF+K   ++ + +K   + FK SLF++GEIG NDY Y      S + +R    L +   T     L+ +G   ++V G+  +G    T   S A+ +   S GC++
Sbjct:   16 AILLFSTISTAATIPNIHRPFNKIYAFGDSFTDTGNSRSGEGPAGFGHLSSPPYGMTFFRRPTNRYSDGRLTIDFVAESMNLPFLPPYLSLKTTNANGTATDTHGVNFAVSGSTVIKHAFFVKNNLSLDM-TPQSIETELAWFEKYLETLGTNQK--VSLFKDSLFWIGEIGVNDYAYTLGSTVSSDTIR---ELSISTFTRFLETLLNKGVKYMLVQGHPATGC--LTLAMSLAAEDDRDSLGCVQ 254          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL74_ARATH (GDSL esterase/lipase At5g03980 OS=Arabidopsis thaliana GN=At5g03980 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.712e-26
Identity = 88/243 (36.21%), Postives = 118/243 (48.56%), Query Frame = 1
Query:   37 LVFALCLLRSVSTSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFK-KLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGA---RLCT*PYSEASRNGLRSNGCLKH 753
            LVF L +    S+     ++I+ FGDS+SDTGN + +G  + P    LP                                      +E   F   VNF V+G+TAL S+ F ++ +     TN  LS+Q+ WFK  L+S+   +  DC    K SLF VGEIGGNDYNY  F G  + ++R+ +P VV AIT A R +I  GAV +VVPGNFP G     L + P  +        NGCL H
Sbjct:   10 LVFILFVSLVHSSDQCPINSIYQFGDSISDTGNLIRNGPASSPTPKPLPQ-------------------------------------REHNVF---VNFGVSGSTALNSSFFSERNLHVPA-TNTPLSMQLAWFKGHLRSTCHGSSSDC---LKHSLFMVGEIGGNDYNYGFFQGKPMEEIRSYIPHVVGAITAAAREVIRAGAVNVVVPGNFPVGCFPIYLTSFPVKDT--KDYDDNGCLTH 206          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.360e-25
Identity = 82/225 (36.44%), Postives = 118/225 (52.44%), Query Frame = 1
Query:   37 LVFALCLLR-SVSTSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKL---------KSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            L F LC+L  + ++    + AIFNFGDS SDTG      A  +P+    PYGETFF  +TGR SDGRL+IDF+AE+F LPYL PYL+   G NFKHG +FA AG+T            G   ++   L VQ   F++             I +     E YF+K+L +  +IG ND     F+  ++ ++ A+VP +V + +   + + + GA    +    P G
Sbjct:   14 LSFLLCMLSLAYASETCDFPAIFNFGDSNSDTGG---KAAAFYPL--NPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLS-SLGSNFKHGADFATAGSTIKLPTTIIPAHGG---FSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKAL-YTFDIGQNDLT-EGFLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIG 227          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 93/251 (37.05%), Postives = 125/251 (49.80%), Query Frame = 1
Query:   49 LCLLR---SVSTSPL-KYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALR--SAIFYKQKIGSRLWTNDSLSVQIDWFK--------KLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGARLCT*PYSEASRNG-LRSNGCLKHQ 756
            LCL     SVS  P   + AI+NFGDS SDTG      + AF  I + PYG+ FF   TGR SDGRL IDF+AE   LPYL  YL    G NF+HG NFA  G+T  R    IF   + G   ++ D    Q D FK        ++KS     +   +  F K+L +  +IG ND +   F   S++QL+A++P +V  + +A R + ++G     V    P G       Y      G L  +GC+K Q
Sbjct:   22 LCLFAVTTSVSVQPTCTFPAIYNFGDSNSDTGGI----SAAFEPI-RDPYGQGFFHRPTGRDSDGRLTIDFIAERLGLPYLSAYLN-SLGSNFRHGANFATGGSTIRRQNETIF---QYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKAL-YTFDIGQNDLSV-GFRTMSVDQLKATIPDIVNHLASAVRNIYQQGGRTFWVHNTGPFGCLPVNMFYMGTPAPGYLDKSGCVKAQ 261          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 77/217 (35.48%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   64 SVSTSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLP--YGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICS---------TRKDCETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            S  +S   + A+FNFGDS SDTG   +S A     IG++P   G  FF  + GR SDGRL+IDF+ E   LPYL PYL    G N++HG NFA  G + +R  +          ++   L  Q+  F   K+   S          R     YF K+L+ + +IG ND     F   +  QL+A++PL+++  T A +LL +EGA    +    P+G
Sbjct:   22 SALSSSCNFPAVFNFGDSNSDTG--AISAA-----IGEVPPPNGVAFFGRSAGRHSDGRLIIDFITENLTLPYLTPYLD-SVGANYRHGANFA-TGGSCIRPTL--------ACFSPFHLGTQVSQFIHFKTRTLSLYNQTNGKFNRLSHTNYFSKALYTL-DIGQNDLAI-GFQNMTEEQLKATIPLIIENFTIALKLLYKEGARFFSIHNTGPTG 219          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.046e-20
Identity = 80/247 (32.39%), Postives = 113/247 (45.75%), Query Frame = 1
Query:   40 VFALCLLRSVSTSP----LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGA--TALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKS-----LFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGARLCT*PYSEASRNGLRSNGCL 747
            +FAL LL S+S S       + AIFNFGDS SDTG    +   A P     P+G +FF    GR  DGRLVIDF+AE+  LPYL  +L    G NF HG NFA AG+   AL S +   ++ G   ++ D   VQ   F     ++ S     +T   +S       +  +IG ND     F   ++ Q+   VP ++    NA + +  +G     +    P G             +   S+GC+
Sbjct:    8 LFALSLLSSLSPSTHAHQCHFPAIFNFGDSNSDTGGLSAAFGQAGP-----PHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLD-SVGSNFSHGANFATAGSPIRALNSTL---RQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCV 245          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.366e-20
Identity = 78/227 (34.36%), Postives = 110/227 (48.46%), Query Frame = 1
Query:   37 LVFALCLLRSVSTSP-LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPY--GETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKL--KSSICSTRKDC-------ETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            ++ A CL+   + SP   + AIFNFGDS SDTG    S        G+ PY  G+TFF   +GR SDGRL+IDF+AE   LPYL  +L    G NF HG NFA AG+T         Q   S +    SL VQ+  F     +S +   R          + YF ++L +  +IG ND      +  + +Q++A +P V   ++N  R +  +G     +    P G
Sbjct:   11 VLLASCLIHPRACSPSCNFPAIFNFGDSNSDTGGLSAS-------FGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLD-SIGSNFSHGANFATAGSTVRPPNATIAQSGVSPI----SLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQAL-YTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQLSNVIRKVYSKGGRRFWIHNTAPLG 224          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 76/226 (33.63%), Postives = 114/226 (50.44%), Query Frame = 1
Query:   97 IFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKS------SICSTRKDC---ETYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGARLCT*PYSEASRNGLRSNGCL 747
            IFNFGDS SDTG  LV+G L + +   LP G +FF+ +TGR SDGRLVIDF+ ++     L PYL    G  F++G NFA+ G++ L   + +            +L++Q+  F   KS      SI    K+    E+ F+ +L+ + +IG ND       G S +++   +P V+  I +A ++L +EG  +  V    P G        S     G   +GCL
Sbjct:   38 IFNFGDSNSDTGG-LVAG-LGYSI--GLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNPYLDSLVGSKFQNGANFAIVGSSTLPRYVPF------------ALNIQLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMI-DIGQNDIADSFSKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGC--LPQKLSMVHSKGFDKHGCL 244          
The following BLAST results are available for this feature:
BLAST of FC921423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
GDL16_ARATH2.581e-4046.23GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL12_ARATH1.716e-3941.60GDSL esterase/lipase At1g28660 OS=Arabidopsis thal... [more]
GDL57_ARATH6.536e-3136.03GDSL esterase/lipase At3g48460 OS=Arabidopsis thal... [more]
GDL74_ARATH3.712e-2636.21GDSL esterase/lipase At5g03980 OS=Arabidopsis thal... [more]
EST_HEVBR5.360e-2536.44Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL76_ARATH7.739e-2437.05GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL54_ARATH4.695e-2135.48GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
FUCO3_ARATH1.046e-2032.39Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL53_ARATH1.366e-2034.36GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
GDL2_ARATH8.855e-2033.63GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32104G09EF RVDevelopN Citrus clementina cDNA clone C32104G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921423 ID=FC921423; Name=FC921423; organism=Citrus clementina; type=EST; length=764bp
GATATATTTATCATATTAGCCATGAAATTTTTTCATCTCGTCTTTGCTTT
GTGTTTGTTGAGGTCAGTTTCAACAAGTCCTTTAAAGTATCATGCAATAT
TCAACTTTGGTGATTCTTTGAGTGACACCGGCAATTTTCTTGTTTCCGGT
GCCCTCGCATTTCCAGTTATCGGAAAACTCCCTTATGGCGAAACCTTCTT
TCGACACGCAACCGGTCGGTGCTCGGATGGACGACTTGTCATTGATTTTA
TGGCTGAGGCATTTCGGTTGCCGTACTTGCCACCATATCTAGCATTAAAA
GAAGGTCAAAATTTTAAACATGGGGTGAATTTTGCTGTTGCTGGTGCTAC
TGCACTTCGATCAGCGATTTTCTATAAGCAAAAAATTGGATCTCGTTTGT
GGACGAATGATTCATTGAGCGTTCAGATCGATTGGTTTAAGAAGCTCAAG
TCCTCAATTTGCTCTACTAGAAAAGATTGTGAGACCTACTTCAAAAAATC
GCTATTTTTCGTGGGAGAGATTGGTGGAAATGACTATAATTATCGTGCGT
TTGTTGGTGGAAGCATTAATCAACTTCGAGCATCCGTGCCTCTCGTTGTT
AAAGCCATTACTAATGCCACCCGTTTGTTGATAGAGGAAGGTGCGGTGGA
GCTGGTGGTGCCGGGGAATTTCCCATCGGGTGCTCGGCTGTGTACTTGAC
CTTATTCAGAAGCCTCACGAAATGGACTACGATCAAATGGGTGCTTGAAG
CACCAATGCTTTGC
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