FC921423

Overview
NameFC921423
Unique NameFC921423
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 74/234 (31.62%), Postives = 114/234 (48.72%), Query Frame = 1
Query:   13 ILAMKFFHLV-FALCLLRSVSTSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSS----ICSTRKDCE------TYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            I  MK F+++ F +  L+  ++    Y + FNFGDS SDTG+ +    +       LP G+  F+ ++ R  DGRLVIDF+ +   LP+L PYL      NFK G NFA AG+T L +             +  S  +QI  F + KS     +  T +  E       Y+ K L+ + +IG ND    AF   +++Q+ AS+P +++      + L EEG   + +    P G
Sbjct:    3 ITKMKLFYVILFFISSLQISNSIDFNYPSAFNFGDSNSDTGDLVAGLGIRLD----LPNGQNSFKTSSQRFCDGRLVIDFLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPA--------NPTSVSPFSFDLQISQFIRFKSRAIELLSKTGRKYEKYLPPIDYYSKGLYMI-DIGQNDI-AGAFYSKTLDQVLASIPSILETFEAGLKRLYEEGGRNIWIHNTGPLG 222          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.365e-19
Identity = 78/245 (31.84%), Postives = 111/245 (45.31%), Query Frame = 1
Query:   46 ALCLLRSVS--TSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETY---------FKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSGARLCT*PYSEASRNGLRSNGCL 747
            AL +LR  S   S      IFNFGDS SDTG  LV+G L +P+    P G  FFR +TGR SDGRL+IDF+ ++     L PYL       F++G NFA+AG+  L   + +            SL++Q+  F   KS          +          FK +L+ + +IG ND       G S +Q    +P ++  I ++ + L +EG     +    P G        S      L  +GCL
Sbjct:   22 ALLILRQPSRAASCTARPVIFNFGDSNSDTGG-LVAG-LGYPI--GFPNGRLFFRRSTGRLSDGRLLIDFLCQSLNTSLLRPYLDSLGRTRFQNGANFAIAGSPTLPKNVPF------------SLNIQVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMI-DIGQNDIARSFARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGC--LPQKLSMVKSKDLDQHGCL 247          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 1
Query:    7 FIILAMKFFHLVFALCLLRSVSTSPLKYHA-----IFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSS----ICSTRKDC--ETYFKKSLFFVGEIGGND 534
            + + +++ F LV  L LL   S S   Y +     + NFGDS SDTG  L    L    IG LP+G TFF   TGR  DGRL++DF  E  ++ YL PYL      NFK GVNFAV+GATAL    F              L++QI  F   K+     I S R+D   +  F+ +L+ + +IG ND
Sbjct:    3 YTVSSLQCFFLVLCLSLL-VCSNSETSYKSNKKPILINFGDSNSDTGGVLAGVGLP---IG-LPHGITFFHRGTGRLGDGRLIVDFYCEHLKMTYLSPYLD-SLSPNFKRGVNFAVSGATALPIFSF-------------PLAIQIRQFVHFKNRSQELISSGRRDLIDDNGFRNALYMI-DIGQND 169          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 76/236 (32.20%), Postives = 111/236 (47.03%), Query Frame = 1
Query:   31 FHLVFALCLLRSVS--TSPLK--------YHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHAT-GRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCE--------TYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            FH +  L L  ++S   SPL         + A+FNFGDS SDTG   +S  L F  + +  Y  TFFR  T GR  +GRL++DF+ EA   PYL PYL     Q ++ G NFA A +T         QK  +  ++     VQ+  F   KS +    +  E         YF  +  ++ +IG ND    AF   +++Q+ A VP+++    +  + L  EGA    +    P G
Sbjct:    5 FHTLLRLLLFVAISHTLSPLAGSFRISNDFPAVFNFGDSNSDTGE--LSSGLGF--LPQPSYEITFFRSPTSGRFCNGRLIVDFLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTI--------QKANAASYSPFGFGVQVSQFITFKSKVLQLIQQDEELQRYLPSEYFFSNGLYMFDIGQNDI-AGAFYTKTVDQVLALVPIILDIFQDGIKRLYAEGARNYWIHNTGPLG 227          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.411e-17
Identity = 69/214 (32.24%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   76 SPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATAL--RSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRK---------DCETYFKKSLFFVGEIGGNDYNYR-AFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            S   + AIFNFGDS SDTG F      AFP     P+G T+F+   GR SDGRL+IDF+A++  +P+L PYL    G +F+HG NFA   +T L   +++F          +  SL++Q++  K+ K ++  +             +  F KSL +   IG ND+    A +G  + +++  +P V+  I    + +   G    +V    P G
Sbjct:   28 SKCDFEAIFNFGDSNSDTGGFWA----AFPAQSG-PWGMTYFKKPAGRASDGRLIIDFLAKSLGMPFLSPYLQ-SIGSDFRHGANFATLASTVLLPNTSLFVSG------ISPFSLAIQLNQMKQFKVNVDESHSLDRPGLKILPSKIVFGKSL-YTFYIGQNDFTSNLASIG--VERVKLYLPQVIGQIAGTIKEIYGIGGRTFLVLNLAPVG 226          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 1
Query:   94 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQN-FKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKS-LFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIE 636
            A+F FGDS+ D GN      L        PYG+T F+  TGR SDGR + DF+AE   LP +P YL    G+N F +GV+FA AGA AL         +G+      +L  Q++ FKK++  + ST  + +     S   ++  IG NDY Y      SI Q       V   + N T ++ E
Sbjct:   39 ALFVFGDSVFDAGNNNYIDTLPSFRSNYWPYGQTTFKFPTGRVSDGRTIPDFIAEYAWLPLIPAYLQPSNGKNQFPYGVSFASAGAGAL---------VGTFPGMVINLKSQLNNFKKVEKLLRSTLGEAQGKMVISRAVYLFHIGVNDYQYPFSTNSSIFQSSPQEIYVDFVVGNTTAVIKE 212          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15
Identity = 64/183 (34.97%), Postives = 89/183 (48.63%), Query Frame = 1
Query:   94 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQN-FKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCE-TYFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIE 636
            A+F FGDS+ D GN      L+       PYG+T F+  TGR SDGRL+ DF+AE   LP +PP L    G + F +GVNFA  GA AL         +G+      +L  Q++ FKK++  + S   D E         ++  IG NDY Y      S+ Q  ++   V   + N T +  E
Sbjct:   37 ALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGAL---------VGTFSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKE 210          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15
Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = 1
Query:   28 FFHLVFALCLLRSVSTSPLKYH------AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICST--RKDCETYFKKSLFFVGEIGGNDYN 540
            FF +   +  L   S++ + ++      A+F FGDS  D GN               PYG+TFF   TGR SDGRL+ DF+AE   LP +PP+L     Q   +GVNFA AGA AL          GS +    +L  Q+D +KK++    +   +++ +    ++++ +  IG NDY+
Sbjct:   20 FFIVSSTILFLAGKSSAKISHNGDNNVTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFGLPTGRFSDGRLISDFIAEYANLPLIPPFLEPGNSQKKLYGVNFASAGAGALVETF-----QGSVI----NLRTQLDHYKKVERLWRTNFGKEESKKRISRAVYLI-SIGSNDYS 188          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 74/232 (31.90%), Postives = 110/232 (47.41%), Query Frame = 1
Query:   13 ILAMKFFHLVFALCLLRSVSTSPLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFF-RHATGRCSDGRLVIDFMAEAFRLPYLPPYL-ALKEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSIC-STRKD-CETYFKKSLFFVGEIGGNDY--NY---RAFVGGSINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPSG 681
            ++ + +F +VF L      S +   + A+F FGDSL D GN     +LA      LPYG  F     TGR S+G+ ++DF+ E   LP +P ++  +  G +  HGVN+A A    L       ++ G  L    S+  Q++ F+K    I  S RK+  + Y  KSL  V  +G NDY  NY   R F+  SI    +   L++   T     L  +G  + V+ G  P G
Sbjct:   22 LVLVPWFLVVFVLAGGEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARS--NYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPEIPAFMDTVDGGVDILHGVNYASAAGGIL-------EETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVV-SLGNNDYINNYLKPRLFLSSSIYDPTSFADLLLSNFTTHLLELYGKGFRKFVIAGVGPLG 243          
BLAST of FC921423 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 59/184 (32.07%), Postives = 86/184 (46.74%), Query Frame = 1
Query:   94 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLAL-KEGQNFKHGVNFAVAGATALRSAIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCET--YFKKSLFFVGEIGGNDYNYRAFVGGSINQLRASVPLVVKAITNATRLLIE 636
            A+F FGDSL + GN     +++       PYG+T F+  TGR SDGR++IDF+AE   LP +PP L          +G+NFA   A      +F     GS    +  L  Q++ FK ++ ++ S   D E      K+++    IG NDY Y  F   S          +   I N T ++ E
Sbjct:   37 ALFAFGDSLFEAGNNNYFDSISSFRSNFWPYGKTTFKFPTGRVSDGRIMIDFIAEYAWLPLIPPNLQPGYSNSQLTYGLNFATTAA-----GVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLGDAEARRVISKAVYLF-HIGANDYQYPFFANTSTFSNTTKERFIDFVIGNTTTVIEE 214          
The following BLAST results are available for this feature:
BLAST of FC921423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
GDL22_ARATH1.510e-1931.62GDSL esterase/lipase At1g54790 OS=Arabidopsis thal... [more]
LIP4_ARATH3.365e-1931.84GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL60_ARATH1.670e-1839.04GDSL esterase/lipase At3g62280 OS=Arabidopsis thal... [more]
GDL49_ARATH1.670e-1832.20GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
GDL61_ARATH2.411e-1732.24GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GLIP2_ARATH5.939e-1635.52GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GLIP1_ARATH1.013e-1534.97GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GLIP5_ARATH2.257e-1532.96GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL75_ARATH1.120e-1431.90GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GRIP4_ARATH4.257e-1432.07GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32104G09EF RVDevelopN Citrus clementina cDNA clone C32104G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921423 ID=FC921423; Name=FC921423; organism=Citrus clementina; type=EST; length=764bp
GATATATTTATCATATTAGCCATGAAATTTTTTCATCTCGTCTTTGCTTT
GTGTTTGTTGAGGTCAGTTTCAACAAGTCCTTTAAAGTATCATGCAATAT
TCAACTTTGGTGATTCTTTGAGTGACACCGGCAATTTTCTTGTTTCCGGT
GCCCTCGCATTTCCAGTTATCGGAAAACTCCCTTATGGCGAAACCTTCTT
TCGACACGCAACCGGTCGGTGCTCGGATGGACGACTTGTCATTGATTTTA
TGGCTGAGGCATTTCGGTTGCCGTACTTGCCACCATATCTAGCATTAAAA
GAAGGTCAAAATTTTAAACATGGGGTGAATTTTGCTGTTGCTGGTGCTAC
TGCACTTCGATCAGCGATTTTCTATAAGCAAAAAATTGGATCTCGTTTGT
GGACGAATGATTCATTGAGCGTTCAGATCGATTGGTTTAAGAAGCTCAAG
TCCTCAATTTGCTCTACTAGAAAAGATTGTGAGACCTACTTCAAAAAATC
GCTATTTTTCGTGGGAGAGATTGGTGGAAATGACTATAATTATCGTGCGT
TTGTTGGTGGAAGCATTAATCAACTTCGAGCATCCGTGCCTCTCGTTGTT
AAAGCCATTACTAATGCCACCCGTTTGTTGATAGAGGAAGGTGCGGTGGA
GCTGGTGGTGCCGGGGAATTTCCCATCGGGTGCTCGGCTGTGTACTTGAC
CTTATTCAGAAGCCTCACGAAATGGACTACGATCAAATGGGTGCTTGAAG
CACCAATGCTTTGC
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