FC921473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: CP2CJ_HUMAN (Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 49/173 (28.32%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 96 RYRLPPGPYPWPIIGNLLDVK-PDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANR-HRPKAVAIISKGGTDLVWADYGAHYVKVRR--VCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602 R +LPPGP P P+IGN+L + D + SKIYGP+ +++ G V++ E+ K+ L D ++ + R H P +A + G +V+++ G + ++RR + TL F + ++ +EE R ++ + K + + + LG N I ++F KRF+ ++ Sbjct: 26 RGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFP--LAERANRGFGIVFSN-GKRWKEIRRFSLMTLRNFGMGK-RSIEDRVQEEARCLVEELRKTKASPCDPTFI---LGCAPCNVICSIIFQKRFDYKD 191
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 105 LPPGPYPWPIIGNLLDVKPDRCRCFAEW----SKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGK 584 LPP P WPI+G+L D+ F ++ ++ YGP++ + G ++ S E A +VL+ D+ L+ R I ++W+D +++ K R++ E+FS K +A RE ++ I T + + LR +L A N + +VF K Sbjct: 28 LPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFIM---TKVGDVVELRSWLFGCALNVLGHVVFSK 188
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 3 Query: 105 LPPGPYPWPIIGNLLDVKPDRCRCF---AEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAV-AIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602 LPPGP WPI+GNL V + F + YG I ++ +GS +IV+++ELA + L Q A+R R I S + A YG + +RR + SP R + R RE + +I I DA +++ + K F + + FG ++EE Sbjct: 27 LPPGPPGWPIVGNLFQVAGSGKQFFEYIRDLKPKYGSIFTLKMGSRTMIIVASAELAHEALIQKGQIFASRPRENPTRTIFSCNKFSVNAAVYGPVWRSLRRNMVQNMLSPSRLKEFREFREIAMDKLIERIRVDAKENNDVVWALKNARFAVFYILVAMCFGVEMDNEE 196
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: CY250_MOUSE (Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 53/178 (29.78%), Postives = 85/178 (47.75%), Query Frame = 3 Query: 96 RYRLPPGPYPWPIIGNLLDVK-PDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHR----PKAV----AIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602 R +LPPGP P PIIGN+L + D C+ F SK+YGP+ ++++G+ V++ E K+ L D ++ A R R KA I SKG VW + + R L KR ++ +EE R ++ + K + + + LG N I ++F RF+ ++ Sbjct: 26 RGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGNKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGN---VWKNTRRFSLTTLR----NLGMGKR--SIEDRVQEEARCLVEELRKTNGSPCDPTFI---LGCAPCNVICSIIFQDRFDYKD 191 The following BLAST results are available for this feature:
BLAST of FC921473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 134
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921473 ID=FC921473; Name=FC921473; organism=Citrus clementina; type=EST; length=707bpback to top |