FC921473

Overview
NameFC921473
Unique NameFC921473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  111 PGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESE 599
            P P   P+IGNL  +     R     S  YGP+M +  G    ++VS++ELA+ VLK  D+  A+R R K    +     D+  A YG ++ +++ VC L LFS K   + R +REEE+  M+  I K  +   N   L K L S+  + I ++  G+++  E
Sbjct:   33 PSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVN---LSKILVSLTNDVICKVALGRKYGGE 192          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 56/165 (33.94%), Postives = 87/165 (52.73%), Query Frame = 3
Query:   96 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRF 590
            R +LPPGP   P+IGNL  +         + S  +GP+M V  G     + S++E AK+VLK  D +  NR +  A  + + G  D+ +  YG  + ++++   LELFSPK+ ++ R IREEE   ++  I  +   +   + LRK L S   + I R  FG+ F
Sbjct:   25 RKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI-SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNF 188          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 49/173 (28.32%), Postives = 86/173 (49.71%), Query Frame = 3
Query:  108 PPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFK-DATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQG 623
            PP P   P++GNL  +     R     S+ YGP+M +  GS   ++ S+ E A++++K+ D   +NR        +     D+ +A YG ++ ++R +C L+L S KR ++ R +REEE   M+  I +   T  + ++ L   L  +  +   R+  GK++    G   G G
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY---GGTTTGDG 197          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 47/159 (29.56%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  105 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVW-ADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVF 578
            LPPGP   PIIGN+  V  +    FA+ +KIYGPIMS+  G   +V++++ E A++VL+  DQ L+ R    ++         ++W     A +  +R++    +FSP+RTEA + +R ++V+ ++ S   +++    ++ + +   +   N I+ ++F
Sbjct:   38 LPPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELV-SFMNESSERKEAVDISRASYTTVLNIISNILF 195          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 51/159 (32.08%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   72 VYRLYPWLRY-------RLPPGPYPWPIIGNLLDVKPDRC-RCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLV 524
            ++ L  W +Y       +LPPGP+  P IG++  +   R  R   + +K YGP+M + +G    V+V++ ++AK+VLK  D   A+R +  A+ II     D+ ++ YG ++ ++R++C  E+ S K   +   IR +EV  +I SI   +++SS  LV
Sbjct:   13 LFLLRKWKKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSI--QSSSSSGELV 169          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 56/211 (26.54%), Postives = 99/211 (46.92%), Query Frame = 3
Query:   84 YPWL---RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAI------VANEFKLG--IPQALW 683
            Y W+   R+RLPPGP  WP++G L  +        A  +K YGP+M + +GS    + S  E AK  LK  D   +NR        ++    D+V+ADYG  +  +R++  + +   K  +    +R++E+  M+ ++  ++      +V+ + L     N + +++  KR    +G    +  EF+ +      VA  F +G  IP   W
Sbjct:   27 YLWMNSRRHRLPPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQG---SESNEFKDMVVELMTVAGYFNIGDFIPSIAW 233          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 54/162 (33.33%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  102 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKY--------LGSVAFNNI 563
            RLPPGP   PI+GNL  + P   +   E ++ YGP+M + +G+   V+VS++E A++VLK  D    +R        +S    ++ +A YG ++ ++R++  LEL S +R +A    RE+E+  ++A + + A  S  S+VL  +        +G+VAF NI
Sbjct:   54 RLPPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDR-AAASKASIVLNDHVFALTDGIIGTVAFGNI 214          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  105 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602
            LPPGP   PIIGNL  +     R   + S+ YGP++ + +G   +V+ S  E  K VLK  D+   +R      A IS    DL +A Y  ++  VR++  +EL++ KR ++ R IREEEV + +  I K + +    + L + L  ++ + I R+ FG   E  +
Sbjct:   29 LPPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFI-KHSASLEEIVNLNQTLVKLSGSVICRVGFGINLEGSK 193          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = 3
Query:   87 PWLRYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNS-SNSLVLRKYLGSVAFNNITRLVFGKR 587
            P   + LPPGP  WPIIG L  +        A+ +  YGPIM + +GS   V+ SN + A+  LK  D   +NR        ++    D+V+A+YG  +  +R++C+L +  PK  E    ++  EV  M+  +++ ++ S    +V+ + L     N I R++  +R
Sbjct:   32 PSHHHHLPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRR 199          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 56/211 (26.54%), Postives = 99/211 (46.92%), Query Frame = 3
Query:   84 YPWL---RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAI------VANEFKLG--IPQALW 683
            Y W+   R+RLPPGP  WP++G L  +        A  +K YGP+M + +GS    + S  E AK  LK  D   +NR        ++    D+V+ADYG  +  +R++  + +   K  +    +R++E+  M+ ++  ++      +V+ + L     N + +++  KR    +G    +  EF+ +      VA  F +G  IP   W
Sbjct:   27 YLWMNSRRHRLPPGPIGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQG---SESNEFKDMVVELMTVAGYFNIGDFIPSIAW 233          
The following BLAST results are available for this feature:
BLAST of FC921473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
C71AQ_ARATH8.866e-1633.13Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH1.158e-1533.94Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA1.158e-1528.32Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C76C4_ARATH1.512e-1529.56Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH1.975e-1532.08Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C75A7_EUSGR2.580e-1526.54Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71E1_SORBI2.580e-1533.334-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BD_ARATH2.580e-1533.13Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME3.369e-1529.76Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C75A5_EUSGR3.369e-1526.54Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionC32105D04EF RVDevelopN Citrus clementina cDNA clone C32105D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921473 ID=FC921473; Name=FC921473; organism=Citrus clementina; type=EST; length=707bp
GACCTATAATTTTATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCG
ATCATCATCTTCATCTTATTCGTTTACAGACTCTATCCATGGCTGAGATA
CAGGCTCCCACCTGGCCCATATCCATGGCCAATCATAGGAAACCTGTTGG
ATGTAAAACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTAC
GGTCCAATCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTC
AAATTCAGAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTGG
CCAATAGGCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACG
GATCTTGTATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGT
ATGCACCCTTGAACTCTTCTCCCCAAAAAGGACAGAGGCCCTTAGGCCCA
TTAGAGAAGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACGCC
ACCAATAGCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGC
TTTCAACAACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAG
AAGGGGTAGTGGATGGCCAAGGACTGGAATTCAGGGCAATTGTTGCTAAC
GAGTTCAAGCTTGGAATCCCACAGGCCTTGTGGAGCCATCAGCTGGCTAA
NGTGGAT
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