FC921478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15 Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKD 561 LKD+GN K NY A YTQAI+ DP+N + NRAAA L A+ D E I+++ ++ K Y R G L AM ++++A++++Q AL +P++ +K Q ++ Sbjct: 88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRE 202
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15 Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKD 561 LKD+GN K NY A YTQAI+ DP+N + NRAAA L A+ D E I+++ ++ K Y R G L AM ++++A++++Q AL +P++ +K Q ++ Sbjct: 88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRE 202
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: RPAP3_RAT (RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15 Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRA 573 LK+KGN++FK G Y +A YT+ + DP NP L +NRA+A+ L K A +D I+L+ + K Y R+G A+++ +DA + L+ P + E + +++++ Q K+ + Sbjct: 136 LKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLEDARKDYVKVLELEPDNFEATNELRKIDQALTSKENS 254 HSP 2 Score: 69.3218 bits (168), Expect = 2.416e-11 Identity = 46/155 (29.68%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 220 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAEECWKHVF 684 KD GN FFK G Y +A YT+ I D +N L +NRA A+L + K +A D I L+ + K + R+G + + ++A F+T L P + + ++ R+ + +K R +V +D Q + K S G+ + K VF Sbjct: 286 KDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQAILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKGRWDDV-----FLDSTQRHNVVKPVDSPHRGSPKALKKVF 435
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14 Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKD 561 LKD+GN K NY A YTQAI+ DP+N + NRAAA L A+ D E I+++ ++ K Y R G L A+ ++++A++++Q AL +P++ +K Q ++ Sbjct: 88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRE 202
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14 Identity = 40/121 (33.06%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 220 KDKGNEFFKAGNYLKAAALYTQAIKQDPS----NPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKR 570 K +GNE+F++ NY A +T+A+ DP N L+SNRAAA +HL ++++A+ D + ++++P + K Y R+ E Y+DA+ ++ A +P++ E+ R IK K R Sbjct: 239 KKEGNEYFQSKNYQAAYDSFTEALSIDPKLETMNSQLYSNRAAALVHLNRISEAINDCTSAVTIDPNYGKAYIRRAQCQMKQENYEDAVRDYEKAQSLDPENGELQRNIKEAKIAHKKSLR 359
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.369e-14 Identity = 47/166 (28.31%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAE--ECWKHVFSFVVETME 708 LK + N++FKA +Y A Y+QAI+ +PSN + NR+ A+L AL DA I L+ ++ KGY+R+ A+ ++ AL ++T ++ P + K + +++ K K + + +V LD + ++Y E K SF+ E M+ Sbjct: 31 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQ 196
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: RPAP3_CHICK (RNA polymerase II-associated protein 3 OS=Gallus gallus GN=RPAP3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14 Identity = 40/130 (30.77%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 220 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQ-LAKDKKRAQEVEN-IRSNV 603 K+KGN++FK GN+ +A YT+ + DP NP L +NRA+AF + K + A +D ++L+ + K Y R+G A++ + A ++ L+ + + E ++K++ Q L+ + +E E +RS + Sbjct: 137 KEKGNKYFKQGNFDEAIKCYTRGMHSDPFNPVLPTNRASAFYRMKKFSVAESDCNLALALDKNYTKAYARRGAARFALKNFQGAKEDYEKVLELDANNYEAKNELKKIEQALSSESSEQKEFEEAVRSEL 266
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: TTC28_HUMAN (Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14 Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 226 KGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEV 522 + N+ G++ A LY +A+ DP N L+SNR+AA++ + + +KAL DA LNP+W K YFR+G L+ + ++ DAL+AF + L +P+S ++ Sbjct: 64 QSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQL 162
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14 Identity = 44/143 (30.77%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 220 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSE 648 K+KGNE+FK ++ A Y +AI+++P++ L+SNRAAA L++ AL D I L+P + K Y RKG + M+ Y AL A+ L+ +P + E +R + + ++++V+ ++FK M++ Sbjct: 382 KNKGNEYFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSKSEKVDE-----------EQFKKSMAD 513 HSP 2 Score: 77.411 bits (189), Expect = 8.873e-14 Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLD 624 LK+ GN+ F+ G Y +A ++ AI DP + L+SN + AF L + +AL A IS+ W KGY RKGC + Q +A + L+ +P + + + +V EN+ N ++ HL+ Sbjct: 10 LKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNKSLQDALSKVRN-----------ENMLENAQLIAHLN 134
BLAST of FC921478 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14 Identity = 46/166 (27.71%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 217 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAE--ECWKHVFSFVVETME 708 LK + N++FKA +Y A Y+QAI+ +PSN + NR+ A+L AL DA I L+ ++ KGY+R+ A+ ++ AL ++T ++ P + K + S++ K K + + +V LD + ++Y E K +F+ + M+ Sbjct: 31 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDKDAKMKYQECSKIVKQKAFERAIAGDEHRRSVVDSLDIESMTIEDEYSGPKLEDGKVTITFMKDLMQ 196 The following BLAST results are available for this feature:
BLAST of FC921478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921478 ID=FC921478; Name=FC921478; organism=Citrus clementina; type=EST; length=736bpback to top |