FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53
Identity = 97/175 (55.43%), Postives = 131/175 (74.86%), Query Frame = 2
Query:   89 FFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            F ++L ++V ++  +++AQL+  FY+ TC N    V+S +Q A+  +AR+G SL+RL FHDCFVNGCDGS+LLD+TSS   EKNA AN NS RGF V+D+IK+A+E ACPG+VSC+DILA+ +  SV + GGPSW V LGRRD  TA+LS ANS +P+P   LN + S+F A+GL
Sbjct:   14 FIISLIVIVSSLFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGL 188          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.123e-52
Identity = 99/191 (51.83%), Postives = 125/191 (65.45%), Query Frame = 2
Query:   59 SYQSMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            S+++ A+ F   L   +         +AQLS  FY NTC N L T+++ V+ AIS E RM ASL+RL FHDCFV GCD S+LLD T S   EK A  N  SARGF +I++ K  VEK CPGVVSCADIL + ARD+   +GGPSW VKLGRRD+ TAS + A + +P P   LN+LIS F + GLS R ++
Sbjct:    7 SFRAKAAIFSLLLLSCM-------QCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMV 190          

HSP 2 Score: 34.2686 bits (77), Expect = 2.123e-52
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIGQA+C  FR
Sbjct:  187 RDMVALSGAHTIGQAQCFLFR 207          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 4.699e-52
Identity = 92/171 (53.80%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  119 AMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            + G   +  L    Y N+C      V S V++ + ++ RM ASLLRL FHDCFVNGCD SVLLD+T    GEK A  N NS RGFEVID+IKS +E  CP  VSCADILA+ ARDSVV+ GGP W+V++GR+D+RTAS  AA +G+P+P S ++ LIS F  LGLS   ++
Sbjct:   41 SFGIGFDLVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMV 211          

HSP 2 Score: 40.0466 bits (92), Expect = 4.699e-52
Identity = 16/21 (76.19%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  616 QQDLVALAGGHTIGQARCTSF 678
            Q D+VAL+GGHT+G+ARCTSF
Sbjct:  207 QTDMVALSGGHTLGKARCTSF 227          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 6.126e-52
Identity = 95/162 (58.64%), Postives = 117/162 (72.22%), Query Frame = 2
Query:  128 SSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            +S+ A LS  FY N+C N    V+S V +A   + RM AS+LRL FHDCFVNGCD SVLLD++ +   EK +NANR+SARGFEVID IKSA+E  CP  VSCAD+LA+ ARDS+VI GGPSW+V LGRRDAR ASL  +   IP+P S L  +++ FN  GL
Sbjct:   35 TSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL 196          

HSP 2 Score: 33.4982 bits (75), Expect = 6.126e-52
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLVAL G HTIG +RC  FR
Sbjct:  200 DLVALLGSHTIGNSRCIGFR 219          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.996e-52
Identity = 90/163 (55.21%), Postives = 119/163 (73.01%), Query Frame = 2
Query:  143 QLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            QL+  FY+ TC N    V+S +Q A   + R+GASL+RL FHDCFV+GCD S+LLD++ S   EKNA  N NSARGF V+DNIK+A+E  CPGVVSC+DILA+ +  SV + GGPSW V LGRRD+ TA+L+ ANS IP+P   L+ + S+F+A+GL+   L+
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLV 163          

HSP 2 Score: 31.187 bits (69), Expect = 7.996e-52
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            DLVAL+G HT G+ARC  F
Sbjct:  161 DLVALSGAHTFGRARCGVF 179          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.042e-51
Identity = 97/171 (56.73%), Postives = 119/171 (69.59%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            + L+  AM S+ +AQLS  FY  +C N L T+KS V +A++ E RMGASL+RL FHDCFV GCD SVLL        E+NA  N  S RGF V+DNIK+ VE  C   VSCADILA+ ARDSVV LGGPSW V LGRRD+ TA+ S AN+ +PAP+S+L +LI  F+  GL
Sbjct:   10 MLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL 175          

HSP 2 Score: 35.4242 bits (80), Expect = 1.042e-51
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            D+VAL+G HTIGQA+C +FR
Sbjct:  179 DMVALSGAHTIGQAQCQNFR 198          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.042e-51
Identity = 97/171 (56.73%), Postives = 119/171 (69.59%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            + L+  AM S+ +AQLS  FY  +C N L T+KS V +A++ E RMGASL+RL FHDCFV GCD SVLL        E+NA  N  S RGF V+DNIK+ VE  C   VSCADILA+ ARDSVV LGGPSW V LGRRD+ TA+ S AN+ +PAP+S+L +LI  F+  GL
Sbjct:   10 MLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL 175          

HSP 2 Score: 35.4242 bits (80), Expect = 1.042e-51
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            D+VAL+G HTIGQA+C +FR
Sbjct:  179 DMVALSGAHTIGQAQCQNFR 198          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.107e-51
Identity = 88/156 (56.41%), Postives = 111/156 (71.15%), Query Frame = 2
Query:  146 LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            L   FY ++C      V+SVV  A+++E RM ASL+RL FHDCFV GCDGS+LLD + S   EKN+N N  SARGFEV+D IK+A+E  CP  VSCAD L + ARDS V+ GGPSW V LGRRD+ +ASLS +N+ IPAP +  N +++RFN  GL
Sbjct:   36 LFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGL 191          

HSP 2 Score: 35.8094 bits (81), Expect = 5.107e-51
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            D+VAL+G HTIG +RCTSFR
Sbjct:  195 DVVALSGSHTIGFSRCTSFR 214          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.661e-51
Identity = 96/182 (52.75%), Postives = 130/182 (71.43%), Query Frame = 2
Query:   74 ASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            AS      +LA++++A+ S+ +AQLS+ FY  +C N L T++S V SA+ +E R+GASLLRL FHDCFV GCD S+LL++TS   GE++   N   + RGF V+++IK+ VE  CPG+VSCADILA+ ARD VV LGGPSW V LGRRD+ TAS +   S +P PTS+L QL+S +N   L+
Sbjct:    7 ASCLNRLSSLAVVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLN 184          

HSP 2 Score: 38.1206 bits (87), Expect = 6.661e-51
Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFRXH 687
            D+VAL+G HTIGQA+C+SF  H
Sbjct:  187 DMVALSGAHTIGQAQCSSFNDH 208          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.255e-50
Identity = 92/176 (52.27%), Postives = 123/176 (69.89%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            LL+L   S ++AQLS +FY  TC  +   V + + +A+  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF+VID +K+A+EKACP  VSCAD+LAI A++S+V+ GGPSW V  GRRD+    +  AN  +P P+S L QL  RF  +GL   + L+
Sbjct:   11 LLLLLQVSLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLV 186          

HSP 2 Score: 30.0314 bits (66), Expect = 4.255e-50
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+++C
Sbjct:  184 DLVALSGGHTFGKSQC 199          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER54_ARATH3.871e-5355.43Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERX_NICSY2.123e-5251.83Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER40_ARATH4.699e-5253.80Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER36_ARATH6.126e-5258.64Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PERA2_ARMRU7.996e-5255.21Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER2_ORYSJ1.042e-5156.73Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.042e-5156.73Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER15_ARATH5.107e-5156.41Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER66_MAIZE6.661e-5152.75Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER38_ARATH4.255e-5052.27Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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