FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 9.423e-50
Identity = 94/176 (53.41%), Postives = 123/176 (69.89%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            LL+L   S ++AQLS +FY  TC  +     + + +A+  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF+VID +K+AVEKACP  VSCAD+LAI A++SVV+ GGPSW+V  GRRD+    +  AN  +PAP   LNQL  RF  +GL   + L+
Sbjct:   11 LLLLIQVSLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLV 186          

HSP 2 Score: 28.8758 bits (63), Expect = 9.423e-50
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  184 DLVALSGGHTFGKNQC 199          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.601e-49
Identity = 92/174 (52.87%), Postives = 114/174 (65.52%), Query Frame = 2
Query:   92 FLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            F    L   A GS     L   FY  +C      V+S+V  A   + RM ASLLRL FHDCFV GCD S+LLD++ +   EK +N NRNSARGFE+I+ IK A+E+ CP  VSCADILA+ ARDS VI GGPSW+V LGRRDAR ASLS +N+ IPAP +    ++++F   GL
Sbjct:   17 FSPFCLCSKAYGSG--GYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGL 188          

HSP 2 Score: 36.965 bits (84), Expect = 1.601e-49
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLV+L+G HTIG +RCTSFR
Sbjct:  192 DLVSLSGSHTIGNSRCTSFR 211          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 7.856e-49
Identity = 91/188 (48.40%), Postives = 125/188 (66.49%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSG-IPAPTSNLNQLISRFNALGLSNRTLL 631
            M  F   F+ + + ++   S   AQLS  FY  +C+N L  ++S V++AI++E RM ASL+R+ FHDCFV+GCD S+LL+ TS+   E++A  N  S RGFEVID  KS VEK CPG+VSCADI+A+ ARD+   +GGP W VK+GRRD+  A  + ANSG +P     L+QL   F+  GL+ R L+
Sbjct:    1 MERFSLRFVLMMVSIILTSSICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLV 188          

HSP 2 Score: 33.8834 bits (76), Expect = 7.856e-49
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +DLVAL+G HTIGQ++C  FR
Sbjct:  185 RDLVALSGAHTIGQSQCFLFR 205          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.954e-48
Identity = 95/163 (58.28%), Postives = 119/163 (73.01%), Query Frame = 2
Query:  128 SSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            S+  AQLS + YA +C NLL  V+  V+ A+  E RM ASL+RL FHDCFVNGCD SVLLD T+S   EK A  N NS RGFEVID IK+AVE ACPGVVSCADIL + ARDSV + GGP W+V LGR+D   A+ S+AN+ +P+P   L+ +I++F A+GL+
Sbjct:   24 SAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNS---EKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLN 182          

HSP 2 Score: 30.8018 bits (68), Expect = 2.954e-48
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            D+VAL+G HT GQA+C  F
Sbjct:  185 DVVALSGAHTFGQAKCDLF 203          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.021e-48
Identity = 90/177 (50.85%), Postives = 123/177 (69.49%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            + +L+L++   + AQLS  FY  TC+N L T++S +++AIS+E RM ASL+RL FHDCFVNGCD SV+L  T +   E+++ AN  SARGFEVID  KSAVE  CPGVVSCADI+A+ ARD+   +GGP + VK+GRRD+  A  + A+  +P   ++LN L   F   GL+ R L+
Sbjct:    6 ILVLLLSLCCFSQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLV 182          

HSP 2 Score: 34.6538 bits (78), Expect = 5.021e-48
Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +DLVAL+G HT+GQA+C +F+
Sbjct:  179 RDLVALSGAHTLGQAQCLTFK 199          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 6.535e-48
Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 2
Query:   62 YQSMASFFKFFLTLALLVLAMGSS-TNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            + S ++ F     + L+ L + +S ++AQL+  FY N+C N+   V+  + + +  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF VID +K+AVE ACP  VSCAD+L I A+ SV + GGPSW+V LGRRD+  A L  AN+ +PAP   L QL   F  +GL+  + L+
Sbjct:    3 FSSSSTLFTCITLIPLVCLILHASLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLV 194          

HSP 2 Score: 28.8758 bits (63), Expect = 6.535e-48
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  192 DLVALSGGHTFGKNQC 207          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.540e-48
Identity = 88/163 (53.99%), Postives = 118/163 (72.39%), Query Frame = 2
Query:  128 SSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            S +NAQL+  FY N+C N+   V+ ++ + +  +  + AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF V+D IK+AVE+ACP  VSCAD+L I A+ SV + GGPSW+V LGRRD+R A L  AN+ +PAP+  L +L + F  +GL+
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLN 167          

HSP 2 Score: 28.8758 bits (63), Expect = 6.540e-48
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  171 DLVALSGGHTFGKNQC 186          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.091e-47
Identity = 94/191 (49.21%), Postives = 130/191 (68.06%), Query Frame = 2
Query:   83 FKFFLTLALLVLAMGSSTNAQLSTNFYAN--------TCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            F F +++A   L  G  +N+ +  +FY+N        +C      V +V++ AI+KE RM ASLLRL FHDCFV GCD S+LLD++++   EKNA  N+NS RGF+VID IK+ +E+ACP  VSCADILA+ AR S ++ GGPSW++ LGRRD+RTASL+ AN+ IPAP S +  L++ F   GL+   L+
Sbjct:   16 FSFDVSVAHPGLGFGWGSNSPIGGSFYSNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLV 206          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.447e-47
Identity = 94/185 (50.81%), Postives = 123/185 (66.49%), Query Frame = 2
Query:   59 SYQSMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            S  S +S +   +TL  L+L    S  AQL+  FY  +C N+   V+  + + +  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF VID +K+AVE+ACP  VSCAD+L I A+ SV + GGPSW+V LGRRD+  A L  AN+ +PAP   L QL + F  +GL
Sbjct:    4 SSSSTSSTWTILITLGCLMLHASLSA-AQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGL 187          

HSP 2 Score: 28.8758 bits (63), Expect = 1.447e-47
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  192 DLVALSGGHTFGKNQC 207          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.447e-47
Identity = 89/169 (52.66%), Postives = 118/169 (69.82%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            LL+L   S ++AQLS +FY  TC  +     + +++A+  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N  SARGF+VID +K+AVEKACP  VSCAD+LAI A+ SVV+ GGPSW+V  GRRD+    +  AN  +P P+S L  L  +F  +GL
Sbjct:   13 LLLLLNVSLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGL 181          

HSP 2 Score: 28.8758 bits (63), Expect = 1.447e-47
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  186 DLVALSGGHTFGKNQC 201          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER37_ARATH9.423e-5053.41Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER72_ARATH1.601e-4952.87Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER5_ARATH7.856e-4948.40Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PERN_ARMRU2.954e-4858.28Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER4_ARATH5.021e-4850.85Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER1A_ARMRU6.535e-4848.44Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1C_ARMRU6.540e-4853.99Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER9_ARATH1.091e-4749.21Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER34_ARATH1.447e-4750.81Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER2_ARMRU1.447e-4752.66Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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