FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 2.458e-47
Identity = 94/185 (50.81%), Postives = 127/185 (68.65%), Query Frame = 2
Query:   59 SYQSMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            SY S++++    +TL  L+L   S ++AQL+  FY NTC ++   V+  + + +  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF VID +K+AVE ACP  VSCADIL I A+ +V + GGPSW+V LGRRD+  A  + AN+ +PAP   L QL + F  +GL
Sbjct:    4 SYSSLSTWTTL-MTLGCLLLH-SSISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGL 186          

HSP 2 Score: 28.8758 bits (63), Expect = 2.458e-47
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  191 DLVALSGGHTFGKNQC 206          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.177e-47
Identity = 88/179 (49.16%), Postives = 114/179 (63.69%), Query Frame = 2
Query:   95 LTLALLVLAMGSSTN-----AQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            LT AL +    +++N       L  +FY ++C      V+SVV  A  +E RM ASL+RL FHDCFV GCDGS+LLD + S   EKN+N N  SARGFEV+D IK+A+E  CP  VSCAD L + ARDS V+ GGPSW V LGRRD+ TAS +  N  +P P +  + +  RF+  GL+
Sbjct:   13 LTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLN 191          

HSP 2 Score: 36.965 bits (84), Expect = 4.177e-47
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLVAL+G HTIG +RCTSFR
Sbjct:  194 DLVALSGSHTIGFSRCTSFR 213          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.243e-47
Identity = 92/182 (50.55%), Postives = 120/182 (65.93%), Query Frame = 2
Query:   68 SMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            S  SF    +TL  L     S ++AQL+  FY  +C N+   V+ ++ + +  + R+ AS+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF  +D IK+AVE+ACP  VSCAD+L I A+ SV + GGPSW+V LGRRD+  A L  AN+ +PAP   L QL   F  +GL
Sbjct:    5 SSTSFTWILITLGCLAF-YASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGL 185          

HSP 2 Score: 28.8758 bits (63), Expect = 9.243e-47
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+ +C
Sbjct:  190 DLVALSGGHTFGKNQC 205          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.205e-46
Identity = 88/170 (51.76%), Postives = 118/170 (69.41%), Query Frame = 2
Query:  125 GSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            G    + L+  FY  +C  L   VKS V  A   ++R+ ASLLRL FHDCFVNGCDGS+LL+++  F GEKNA  NRNS RGFEVI++IKS +E +CP  VSCADI+A+ AR++VV+ GGP W V LGRRD+ TAS  AAN+ +P+P   L  + ++F  LGL  + +++
Sbjct:   41 GHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVV 210          

HSP 2 Score: 26.5646 bits (57), Expect = 1.205e-46
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARC 669
            +D+V L+G HTIG A+C
Sbjct:  206 KDVVVLSGAHTIGFAQC 222          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.571e-46
Identity = 92/163 (56.44%), Postives = 116/163 (71.17%), Query Frame = 2
Query:  128 SSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            S   AQLS + YA +C NL+  V+  V  A+  E RM ASL+RL FHDCFVNGCD S+LLD   S   EK A  N NSARGFEVID IK+AVE ACPGVVSCADIL + ARDSVV+ GGP W+V LGR+D   A+ ++AN+ +P+P   L+ +I++F A+ L+
Sbjct:   24 SGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLN 182          

HSP 2 Score: 31.187 bits (69), Expect = 1.571e-46
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            D+VAL+G HT GQA+C  F
Sbjct:  185 DVVALSGAHTFGQAKCAVF 203          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.479e-46
Identity = 88/175 (50.29%), Postives = 124/175 (70.86%), Query Frame = 2
Query:   95 LTLALLVLAMGSST-NAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            L + ++  A+ +ST +AQLS+ FY  +C + + T+ S V SA++++AR+GASLLRL FHDCF+ GCD S+LL++TS   GE+    N   + R F+V+++IK+ VE ACPGVVSCADILA+ ARD VV LGGPSW V LGRRD+ T S  +  S +P PTS+L  L++ ++   L
Sbjct:   13 LLVVVVAAALSASTASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL 183          

HSP 2 Score: 38.1206 bits (87), Expect = 3.479e-46
Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFRXH 687
            D+VAL+G HTIGQA+C+SF  H
Sbjct:  187 DMVALSGAHTIGQAQCSSFNGH 208          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 7.694e-46
Identity = 88/171 (51.46%), Postives = 118/171 (69.01%), Query Frame = 2
Query:  113 VLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRT 625
            +L   S++NAQL  +FY  TC  +   + +++   +  + R+ ASLLRL FHDCFV GCD S+LLDN++SF  EK+A  N NSARGF VID +K A+E+ACPG VSCADIL I ++ SV++ GGP W V LGRRD+  A  + AN+ +P+P  NL QL + F  +GL NRT
Sbjct:   20 LLLQASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGL-NRT 189          

HSP 2 Score: 31.187 bits (69), Expect = 7.694e-46
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+A+C
Sbjct:  191 DLVALSGGHTFGRAQC 206          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.306e-45
Identity = 92/186 (49.46%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   59 SYQSMASF-FKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            S  S+ SF +   +T+  L+L   S ++AQL+  FY  +C  +   V+  + + +  + R+  S+LRL FHDCFVNGCD S+LLDNT+SF  EK+A  N NSARGF VID +K+AVE+ACP  VSCAD+L I A+ SV + GGPSW+V LGRRD+  A L  AN+ +PAP   L QL + F  +GL
Sbjct:    4 SSSSITSFTWTVLITVGCLMLC-ASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGL 188          

HSP 2 Score: 26.5646 bits (57), Expect = 1.306e-45
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+G HT G+ +C
Sbjct:  193 DLVALSGAHTFGKNQC 208          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.912e-45
Identity = 82/168 (48.81%), Postives = 116/168 (69.05%), Query Frame = 2
Query:  113 VLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            +L   S++NAQL  +FY  TC  +   +   + + +  + R+ ASLLRL FHDCFV GCD S+LLDN++SF  EK+A  N+NS RGF+VID +K+A+E+ACP  VSCADI+ I ++ SV++ GGP W V LGRRD+  A  + AN+ +P+P S L QL + F  +GL+
Sbjct:   20 LLLQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLN 187          

HSP 2 Score: 31.187 bits (69), Expect = 4.912e-45
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+GGHT G+A+C
Sbjct:  191 DLVALSGGHTFGKAQC 206          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.914e-45
Identity = 87/162 (53.70%), Postives = 105/162 (64.81%), Query Frame = 2
Query:  146 LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L   FY  +C      VK  ++ A+ K+ RM ASLLRL FHDCFV GCD SVLLD       EK A  N NS RGFEVID IK  +E+ACP  VSC+DILA+ ARDSV + GGP W+V LGRRD+  AS + AN  IPAP S+L+ LI  F   GL+ + L+
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLI 191          

HSP 2 Score: 38.1206 bits (87), Expect = 4.914e-45
Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            QDL+AL+G HTIG+ARC SF+
Sbjct:  188 QDLIALSGAHTIGKARCVSFK 208          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER32_ARATH2.458e-4750.81Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER14_ARATH4.177e-4749.16Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER1B_ARMRU9.243e-4750.55Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER10_ARATH1.205e-4651.76Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER59_ARATH1.571e-4656.44Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER42_MAIZE3.479e-4650.29Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER22_ARATH7.694e-4651.46Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER33_ARATH1.306e-4549.46Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER23_ARATH4.912e-4548.81Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER20_ARATH4.914e-4553.70Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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