FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.061e-41
Identity = 86/177 (48.59%), Postives = 113/177 (63.84%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSS--FTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L +L  G  +NAQL+++FY+ TC N+    + +++ A   + R+ A ++RL FHDCFVNGCDGSVLLD   +    GEK A  N  S  GFEVID+IK+A+E  CPGVVSCADILAI A  SV + GGPS  V LGRRD RTA  + A + +P    +L  L S+F+   L    L+
Sbjct:   12 LPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLV 188          

HSP 2 Score: 27.335 bits (59), Expect = 3.061e-41
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLVAL+G HT G+ +C
Sbjct:  186 DLVALSGAHTFGRVQC 201          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.572e-41
Identity = 88/164 (53.66%), Postives = 112/164 (68.29%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRF 598
            ++++A+ ++ + QLS+ FY  +C   L  +KS V +A+S + RMGASLLRL FHDCF  GCD SVLL        E+NA  N  S RGF VIDNIK+ +E  C   VSCADIL + ARDSVV LGGPSW V LGRRD+ TAS S ANS +P P+S+ +QL + F
Sbjct:   12 VVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAF 168          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.149e-40
Identity = 80/182 (43.96%), Postives = 119/182 (65.38%), Query Frame = 2
Query:   92 FLTLALLVLAMGSSTNAQ-LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            FL +   +L+  + TN Q L   FY   C      VK  V  A+  +  + A LLR+FFHDCFV GC+GSVLL+  +    EKN+  N  + RGFE+IDN+K+A+EK CPG+VSC+D+LA+ ARD++V L GPSW+V+ GRRD    +++ A   +P+P +N++ LI++F + GL  + L++
Sbjct:   13 FLQVIYCLLSSFAPTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNK-KDEKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVV 192          

HSP 2 Score: 29.6462 bits (65), Expect = 1.149e-40
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  616 QQDLVALAGGHTIGQARC 669
            ++DLV L+GGHTIG   C
Sbjct:  187 KKDLVVLSGGHTIGNGHC 204          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.311e-40
Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 2
Query:  194 VKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTS-SFTGEKNANANRNSARGFEVIDNIKSAVEKACPGV-VSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            V++VV SAI  E RMGASL+RL FHDCFV+GCDG +LLD+ + +FTGE+N+  N NSARG+EVI   K +V   CP V VSCADILAI ARDSV  LGG ++ V LGR DARTA+ S A + +PAP  NL   I +F+    + R ++
Sbjct:   86 VRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMV 233          

HSP 2 Score: 30.0314 bits (66), Expect = 4.311e-40
Identity = 11/19 (57.89%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTS 675
            +++VALAG HT+G ARC++
Sbjct:  230 REMVALAGAHTVGFARCST 248          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 5.616e-40
Identity = 82/148 (55.41%), Postives = 104/148 (70.27%), Query Frame = 2
Query:  194 VKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTS-SFTGEKNANANRNSARGFEVIDNIKSAVEKACPGV-VSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            V+ VV SAI  E RMGASL+RL FHDCFV+GCDG +LLD+ + +FTGE+N+  N NSARG+EVI   K +V   CP + VSCADILAI ARDSV  LGG ++ V LGR DARTA+ + A + +PAP  NL   I +FN    + R ++
Sbjct:   85 VRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMV 232          

HSP 2 Score: 30.0314 bits (66), Expect = 5.616e-40
Identity = 11/19 (57.89%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTS 675
            +++VALAG HT+G ARC++
Sbjct:  229 REMVALAGAHTVGFARCST 247          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.318e-40
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  131 STNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTS-SFTGEKNANANRNSARGFEVIDNIKSAVEKACPGV-VSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            +++  LS      +C  +   VK VV SAI  E RMGASL+RL FHDCFV+GCDG +LLD+ + +FTGE+N+  N NS RGFEVI   K +V  +CP + VSCADILAI ARDS+  LGG ++ V LGR DA TA+ S A + +PAP+ NL   I +F+    + R ++
Sbjct:   66 NSDKYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMV 232          

HSP 2 Score: 30.0314 bits (66), Expect = 7.318e-40
Identity = 11/19 (57.89%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTS 675
            +++VALAG HT+G ARC++
Sbjct:  229 REMVALAGAHTVGFARCST 247          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.244e-39
Identity = 78/185 (42.16%), Postives = 109/185 (58.92%), Query Frame = 2
Query:   86 KFFLTLALLVLAMGSST--NAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            +F L L ++++  G  T   AQL   FY  TC      V+ VV   I+    + A L+R+ FHDCFV GCDGS+L++ TSS    +       + RGF+ ID +KSA+E  CPG+VSCADI+ +  RDS+V +GGP+W V  GRRD R ++ + A + IP P  N   LI+ F   GL  + L+L
Sbjct:    3 RFGLALLMILVIQGLVTFSEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVL 187          

HSP 2 Score: 30.4166 bits (67), Expect = 1.244e-39
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +DLV L+G HTIG + C+SF
Sbjct:  183 KDLVLLSGAHTIGVSHCSSF 202          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.111e-39
Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = 2
Query:   95 LTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            + +  +++ M  S+ AQL  NFYA +C N    +   +Q+ I     + A L+R+ FHDCFV GCDGSVL+++TS    E++A  N  + RGF  ++ IK+ +EK CP  VSCADI+A+TARD+VV  GGPSW V  GRRD R ++ + A + IP PTSN   L   F   GL+ + L+L
Sbjct:   12 VVVVTVLIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSG-NAERDAPPNL-TLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVL 189          

HSP 2 Score: 28.1054 bits (61), Expect = 2.111e-39
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTS 675
            +DLV L+G HTIG + C+S
Sbjct:  185 KDLVLLSGAHTIGVSHCSS 203          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 3.584e-39
Identity = 78/176 (44.32%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            LL  A   +++AQL   FY+N+C ++   V+  +  A+     +   LLR+ FHDCFV GCDGSVLLD+  + T EK+A  N+ + RGF  ++ +K+AVEKACPG VSCAD+LA+ ARD+V +  GP W V LGRRD R  S++     +P PT+N  +L   F A  L  + L++
Sbjct:   11 LLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGR-VSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVV 184          

HSP 2 Score: 30.0314 bits (66), Expect = 3.584e-39
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +DLV L+ GHTIG + C SF
Sbjct:  180 KDLVVLSAGHTIGTSHCFSF 199          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 2
Query:   98 TLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRF 598
            T  L+++A+ ++ +AQLS  FY  +C   L T+KS V +A++ + RMGASLLRL FHDCFV GCD SVLL        E+NA  N  S RGF VID+IK+ +E  C   VSCADIL + ARDSVV LGGPSW V LGRRD+  A+ + AN+ +P   S+  +L + F
Sbjct:    7 TSLLVLVALVTAASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAF 168          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER58_ARATH3.061e-4148.59Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER1_WHEAT7.572e-4153.66Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER56_ARATH1.149e-4043.96Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER1_SOLLC4.311e-4056.08Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU5.616e-4055.41Suberization-associated anionic peroxidase OS=Sola... [more]
PER2_SOLLC7.318e-4049.70Suberization-associated anionic peroxidase 2 OS=So... [more]
PER39_ARATH1.244e-3942.16Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER30_ARATH2.111e-3944.44Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ORYSJ3.584e-3944.32Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_HORVU7.087e-3950.90Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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