FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.929e-39
Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 2
Query:   95 LTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L L ++V+ + S     LS ++Y +TC      V + V+ A+S +  + A+LLR+ FHDCFV GCDGSVLLD+      EK+   N  S   F VIDN K A+E+ CPG+VSCADIL++ ARD+V + GGP+W V  GR+D R  S +     +PAPT N++QL   F   GLS   L+
Sbjct:    6 LNLLVIVIFVVSFDVQALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLSMHDLV 182          

HSP 2 Score: 34.6538 bits (78), Expect = 7.929e-39
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLVAL+GGHT+G A C+SF+
Sbjct:  180 DLVALSGGHTLGFAHCSSFQ 199          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.562e-38
Identity = 88/223 (39.46%), Postives = 126/223 (56.50%), Query Frame = 2
Query:   71 MASFF-KFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPT---------------------------------VKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGV-VSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            MASF  +  L L+ + LA+   +  Q + +   +T  NL+PT                                 VK +V +AI+ E RMGASL+RL FHDCFV+GCDG +LL++T++FTGE+ A AN NS RGF VID  K   +  C    VSCAD+LAI ARD+       ++ + LGR+DARTA+L+ AN+ +PAP  NL+   ++F   G + R +++
Sbjct:    1 MASFVARLTLALSFIALALAGYSLVQNTLSSPTHTRLNLIPTWLDSTFDSADVLSYLGFGKSSGRLSDSNCVFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVV 223          

HSP 2 Score: 28.4906 bits (62), Expect = 8.562e-38
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 1
Query:  616 QQDLVALAGGHTIGQARC 669
            Q+++V LAG HT+G +RC
Sbjct:  218 QREMVVLAGAHTVGFSRC 235          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.568e-38
Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = 2
Query:   86 KFFLTLALLV-LAMGSSTNAQLSTN--FYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            KF L    ++ L +G +T     T   FY+ TC      V+S V+S ++ +  + A +LR+ FHDCFV GCDGS+L+   ++   EK A AN    RG+E+ID+ K+ +E ACPGVVSCADILA+ ARDSVV+ GG SWQV  GRRD R +  S   S +PAP+ +++    +F A GL+ + L+
Sbjct:    9 KFILVFVFMLGLCIGITTVHGQGTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDV-SNLPAPSDSVDVQKQKFAAKGLNTQDLV 188          

HSP 2 Score: 31.5722 bits (70), Expect = 8.568e-38
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            QDLV L GGHTIG + C  F
Sbjct:  185 QDLVTLVGGHTIGTSECQFF 204          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.211e-37
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGV-VSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            LL L +G  +  +L        C  +   VK VV +AI+ EARMGASL+RLFFHDCFV+GCD  +LL++T++FTGE+ A  N NS RGF VI+  K  V+   P + VSCADIL+I ARDS     G ++ V LGR+DARTA+ + AN+ +  P  NL   +++F A G +   ++
Sbjct:   52 LLSLGLGKPSGGKLGDE----AC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMV 221          

HSP 2 Score: 27.335 bits (59), Expect = 3.211e-37
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            ++VAL G HTIG ARC
Sbjct:  219 EMVALLGSHTIGFARC 234          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.189e-37
Identity = 73/159 (45.91%), Postives = 102/159 (64.15%), Query Frame = 2
Query:  158 FYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            FY  TC      V++ V +  S + R+   +LR+ FHDCFV GCDGS+L+   ++   E+ A  N N  +GFEVIDN K+ +E ACPGVVSCADILA+ ARD+V++  G  WQV  GRRD R +  S AN+ +P P  ++     +F+ALGL+ R L++
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVV 192          

HSP 2 Score: 31.9574 bits (71), Expect = 4.189e-37
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +DLV L GGHTIG A C  FR
Sbjct:  188 RDLVVLVGGHTIGTAGCGVFR 208          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.449e-37
Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 2
Query:  146 LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            L   FY  +C      VK  V+    +++ +   L+R+ FHDCFV GCDGSVL+D+T S T EK++ AN  S RGFEVID+ K+ +E  C GVVSCADI+A  ARDSV I GG  + V  GRRD R +  S A++ +P PT  ++QL   F+  GL+
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLT 217          

HSP 2 Score: 31.187 bits (69), Expect = 5.449e-37
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  616 QQDLVALAGGHTIGQARCTSF 678
            Q ++V L+G HTIG++ C+SF
Sbjct:  218 QDEMVTLSGAHTIGRSHCSSF 238          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.571e-36
Identity = 75/173 (43.35%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSAR-GFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            L +L+ +M + +NAQLS N+YA+TC ++   VK  V +   +      + LR+FFHDCFV GCD SV + + +    EK+A+ N++ A  GF+ +   K+AVE  CPGVVSCADILA+ ARD VV++GGP ++V+LGRRD   +  S     +P P  ++  L+  F + GLS
Sbjct:   17 LGMLLFSMVAESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS 188          

HSP 2 Score: 29.261 bits (64), Expect = 1.571e-36
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            D++AL+G HTIG + C  F
Sbjct:  191 DMIALSGAHTIGSSHCNRF 209          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.896e-36
Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 2
Query:  113 VLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            VLA+   + A L  ++Y  +C      +   V++A   + ++ A LLR+FFHDCF+ GCD S+LLD+T S   EK+   N  S R F VI++ K  +EKACP  VSCAD++AI ARD V + GGP W V  GR+D  T S +     +P PT N++QLI  F A GLS + ++
Sbjct:   15 VLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVKDMV 185          

HSP 2 Score: 31.9574 bits (71), Expect = 5.896e-36
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +D+V L+GGHTIG + C+SF
Sbjct:  182 KDMVTLSGGHTIGFSHCSSF 201          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 7.665e-36
Identity = 78/170 (45.88%), Postives = 102/170 (60.00%), Query Frame = 2
Query:  110 LVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLD-NTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            L L + ++  AQL   FY  +C N    V+  V +A +K+A + A L+RL FHDCFV GCDGSVLL  N      E++A  N  S RGF+VID  K+AVE++CP  VSCADI+A  ARDS+ + G  S+QV  GRRD R ++ +     +P PTS    L   F A  LS
Sbjct:   23 LCLLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELS 191          

HSP 2 Score: 29.6462 bits (65), Expect = 7.665e-36
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +D+V L+G HT+G++ C SF
Sbjct:  193 EDMVVLSGAHTVGRSFCASF 212          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.888e-35
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  146 LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            LS  +Y  +C      VK+ V +A+  +  + A L+R+ FHDCF+ GCD S+LLD+T   T EK++ AN  S RG+E+ID+ K  +E  CPGVVSCADI+A+ ARD+V   GGP + +  GR D + + +    + +P+P  N +QLI  F   G +
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFT 180          

HSP 2 Score: 35.8094 bits (81), Expect = 4.888e-35
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            QD+VAL+G HT+G ARC+SF+
Sbjct:  182 QDVVALSGAHTLGVARCSSFK 202          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER64_ARATH7.929e-3944.69Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PERN_IPOBA8.562e-3839.46Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_ARAHY8.568e-3844.32Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PERA_IPOBA3.211e-3746.02Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER71_ARATH4.189e-3745.91Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER5_VITVI5.449e-3747.13Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER55_ARATH1.571e-3643.35Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER66_ARATH5.896e-3643.35Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER1_MAIZE7.665e-3645.88Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER47_ARATH4.888e-3542.04Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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