FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.079e-34
Identity = 66/189 (34.92%), Postives = 113/189 (59.79%), Query Frame = 2
Query:   53 LASYQSMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            +A    + +     L L L   ++  +  + L+ +FY+ +C   L  ++  + +         A+ LRLFFHDCF NGCD SVL+ +T+  T E++++ N +    GF+V+   K+A+E ACP  VSC+DI+A+  RD +V +GGP +++ LGRRD+RT+  S  +  +P P+  +++LI +F++ G S
Sbjct:    1 MAEQSQLKNLTIILLLLCLSFQSLSFAAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFS 189          

HSP 2 Score: 29.261 bits (64), Expect = 1.079e-34
Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  604 SRTFQ-QDLVALAGGHTIGQARCTSF 678
            SR F  Q++VAL+G HTIG + C  F
Sbjct:  185 SRGFSVQEMVALSGAHTIGFSHCKEF 210          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.406e-34
Identity = 75/181 (41.44%), Postives = 105/181 (58.01%), Query Frame = 2
Query:   92 FLTLALLVLAMGSSTNAQLSTN-FYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            ++ + +LVL +G    +QL  N +Y+ +C      V+S V+S    +  +   LLRL FHDCFV GCDGSVL+   S+    + A       RG EVID+ K+ +E  CPGVVSCADILA+ ARDSV +  GPSW+V  GR+D R  SL+   S +P+P  ++     +F   GL    L+
Sbjct:   10 YIMIIMLVLVLGKEVRSQLLKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSA----EQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGR-ISLATEASNLPSPLDSVAVQKQKFQDKGLDTHDLV 185          

HSP 2 Score: 30.0314 bits (66), Expect = 1.406e-34
Identity = 13/20 (65.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLV L G HTIGQ  C  FR
Sbjct:  183 DLVTLLGAHTIGQTDCLFFR 202          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.386e-34
Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 2
Query:   77 SFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            SF    + L+ L+   G  T       FY+ TC N    V++ V S    + ++   LLR+  HDCFV GCDGSVLL   +S   E+ A AN N   GFEVID+ K  +E ACPGVVSCADILA+ ARDSV +  G SWQV  GRRD R +  S  N+ +P+P+ +L     +F+A  L+ R L+
Sbjct:    6 SFALVIVFLSCLIAVYGQGTRI----GFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNS---ERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLV 181          

HSP 2 Score: 25.0238 bits (53), Expect = 2.386e-34
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  619 QDLVALAGG-HTIGQARC 669
            +DLV L GG HTIG A C
Sbjct:  178 RDLVTLVGGGHTIGTAAC 195          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.387e-34
Identity = 69/189 (36.51%), Postives = 114/189 (60.32%), Query Frame = 2
Query:   53 LASYQSMASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            +AS +S+   F FF T             ++L+TNFY+ TC   L  ++  + +         A+++RLFFHDCF NGCD SVL+ +T+  T E++++ N +    GF+VI   K+A+E ACP  VSC+DI+++  RD ++ +GGP + V LGRRD+RT+  S     +P P++ ++++I +F + G +
Sbjct:    1 MASLKSLFLLFLFFFT-----------AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFT 178          

HSP 2 Score: 27.335 bits (59), Expect = 2.387e-34
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            Q++VAL+G H+IG + C  F
Sbjct:  180 QEMVALSGAHSIGFSHCKEF 199          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.107e-34
Identity = 72/185 (38.92%), Postives = 113/185 (61.08%), Query Frame = 2
Query:   86 KFFLTLALLVLAMGSSTNAQ--LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            K  L L +L+  +G S      L  ++Y + C      V+ V    +S++  + A LLR+ FHDCFV GCDGSVLL +  +   E++A  N  + +G+EV+D  K+A+E+ CP ++SCAD+LA+ ARD+V ++GGP W V LGRRD R + L+ A   +P+P +++  L   F   GL+ + L++
Sbjct:    4 KNILALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVV 186          

HSP 2 Score: 28.1054 bits (61), Expect = 3.107e-34
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARC 669
            +DLV L+GGHTIG + C
Sbjct:  182 KDLVVLSGGHTIGISSC 198          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.270e-34
Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   92 FLTLALLVLAMG-----SSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            FL L   V A G     S    +    FY N C+N+   V+SVVQS +         +LR+ FHDCFV+GCDGSVLL   +S   E+ A  NR S RGFEVI+  K+ +EKACP  VSCADIL + ARD+VV+ GG  W+V LGR D R +  S  N  +P P+ ++ +    F A  L+   L+
Sbjct:   14 FLVLVAAVTAQGNRGSNSGGGRRPHVGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTS---ERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVN--LPGPSDSVAKQKQDFAAKTLNTLDLV 192          

HSP 2 Score: 28.8758 bits (63), Expect = 5.270e-34
Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLV L GGHTIG A C
Sbjct:  190 DLVTLVGGHTIGTAGC 205          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 5.271e-34
Identity = 77/183 (42.08%), Postives = 115/183 (62.84%), Query Frame = 2
Query:   86 KFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            K  L L+L+ +  G S  A L   FY+NTC      VK VV  A   +  + A LLRL FHDCFV GCDGS+L++N +    EKNA  +    RGFE+++ +K+ +E ACPGVVSC+DI+A+ ARD++ +  GP+++V  GRRD R +++S A   +P  + ++  L ++F   GL+ + L+L
Sbjct:    7 KMRLALSLVTVFFGISL-ANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGA--ISEKNAFGHEG-VRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEILKAKFMQKGLNAKDLVL 184          

HSP 2 Score: 23.483 bits (49), Expect = 5.271e-34
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARC 669
            +DLV L+  HTIG   C
Sbjct:  180 KDLVLLSAAHTIGTTAC 196          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.937e-34
Identity = 82/183 (44.81%), Postives = 108/183 (59.02%), Query Frame = 2
Query:  104 ALLVLAMGS---STNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTS-SFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVIL--GGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            ALL+LA  +   S    L   +Y  TC      VK+ ++ AI++    GA+++R+ FHDCFV GCD SVLLD T  S T EK A  N  S RGFE+ID IK A+E ACPGVVSCADI+A  ARD+   L  G  S+ +  GR D   ++ S +   +  PTSNL+ L S F   G+S   L++
Sbjct:   18 ALLLLAAAACQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVV 200          

HSP 2 Score: 31.9574 bits (71), Expect = 8.937e-34
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +DLV L+G HT+G++ C+SF
Sbjct:  196 EDLVVLSGAHTVGRSHCSSF 215          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.517e-33
Identity = 79/191 (41.36%), Postives = 112/191 (58.64%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLAMGSS---TNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            MAS ++   +  L +L   SS   ++A LS NFYA++C      V++ V+SA S +  +   LLRLFFHDCFV GCD SVL+   S+   EK+   N  S  GF VID  K+A+E  CP  VSCADI+A+ ARD+V   GGP  ++  GRRD + +  +     I      L+Q+I  F++ GLS + L++
Sbjct:    1 MASSYRINCSTLLHLLMFLSSLLTSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNST---EKSDPGNA-SLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVV 187          

HSP 2 Score: 31.187 bits (69), Expect = 1.517e-33
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            QDLV L+G HTIG + C +F
Sbjct:  183 QDLVVLSGAHTIGASHCNAF 202          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.517e-33
Identity = 71/173 (41.04%), Postives = 108/173 (62.43%), Query Frame = 2
Query:   98 TLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            ++ LL+L +     AQL   FY+ +C N    V+++V+   +++  + A+L R+ FHDCFV GCD S+L+D T+S   EKNA  N  S RGFE+ID IK+A+E  CP  VSC+DI+ +  RD+V + GGPS+ V  GRRD   ++   AN  +P P  ++  ++S F   G++
Sbjct:    7 SVLLLLLFIFPVALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN 178          

HSP 2 Score: 26.5646 bits (57), Expect = 1.517e-33
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            D VAL G HT+G A C +F
Sbjct:  181 DSVALLGAHTVGIASCGNF 199          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER63_ARATH1.079e-3434.92Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER25_ARATH1.406e-3441.44Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER62_ARATH2.386e-3444.32Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER31_ARATH2.387e-3436.51Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER1_ARATH3.107e-3438.92Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER69_ARATH5.270e-3443.78Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER43_ARATH5.271e-3442.08Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER2_MAIZE8.937e-3444.81Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER46_ARATH1.517e-3341.36Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER28_ARATH1.517e-3341.04Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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