FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSA-RGFEVIDNIKSAVEK--ACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L L++     +T AQLS  FY+ TC N+   V++ VQ  I K      + LRLFFHDCFVNGCD SV++ +T     EK+   N + A  GF+V+   K A++   +C   VSCADIL +  RD VV  GGPS++V+LGR D   ++ S+    +P P+ N+++L + F    L+   ++
Sbjct:   12 LCLIISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMI 191          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.186e-30
Identity = 70/178 (39.33%), Postives = 105/178 (58.99%), Query Frame = 2
Query:   95 LTLALLVLAMGSS-TNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSA-RGFEVIDNIKSAVEKA--CPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            L L LL L +    ++AQL  NFYA +C N+   V++ VQ  + +      + LRL+FHDCFVNGCD SV++ +T++   EK+   N + A  GF+ +   K A++    C   VSCADIL +  RD V + GGP + V+LGR D  +++ ++    +P PT ++N+L S F   GLS
Sbjct:    9 LLLLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLS 186          

HSP 2 Score: 28.4906 bits (62), Expect = 4.186e-30
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCT 672
            D++AL+G HT+G A CT
Sbjct:  189 DMIALSGAHTLGFAHCT 205          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.186e-30
Identity = 79/196 (40.31%), Postives = 104/196 (53.06%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLAMGSSTNAQLSTNF--------YANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            M SF        LL   +  +TNA  + NF        Y + C N+   V+SVV+S           +LR+ FHDCFV GCD SVLL   +S   E+ A  N  S RGF VI+  K+ +E ACP  VSCADILA+ ARD V + GGP W V LGR D R +   A+N  +P PT ++     RF    L+ + L++
Sbjct:    1 MRSFTNLNPCYVLLPFFLVLATNATHTNNFLPRPRTGYYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNS---ERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQDLVV 190          

HSP 2 Score: 33.113 bits (74), Expect = 4.186e-30
Identity = 15/21 (71.43%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            QDLV LA GHTIG A C  FR
Sbjct:  186 QDLVVLAAGHTIGTAGCIVFR 206          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30
Identity = 73/183 (39.89%), Postives = 110/183 (60.11%), Query Frame = 2
Query:   92 FLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSA-RGFEVIDNIKSAVEK--ACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            F  +ALL++   SS  AQL TNFY  +C N+   V++ V+    +      + LRLFFHDCFV GCD S+LL + S    EK+   +++ A  GF+ +   K A+++   C   VSCADILA+  RD VV+ GGP++ V+LGRRD R +++++    +P P+  L+QL + F   GLS   ++
Sbjct:    7 FSIVALLLIFFSSSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMI 185          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.451e-30
Identity = 63/188 (33.51%), Postives = 102/188 (54.26%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            M+S       + + V ++ S+    L+ ++Y  TC +    V+  V     ++    A  LRLFFHDCF+ GCD SVL+   S    E++ + N +     F+++  IK+A+E +CPGVVSCADILA   RD V ++GGP ++VKLGR+D   +        +P    ++  ++S F   G + + L+
Sbjct:    1 MSSVINVLFVVLVFVPSIYSAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELV 188          

HSP 2 Score: 30.4166 bits (67), Expect = 5.451e-30
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            ++LVAL+GGHTIG + C  F
Sbjct:  185 KELVALSGGHTIGFSHCKEF 204          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 80/202 (39.60%), Postives = 117/202 (57.92%), Query Frame = 2
Query:   95 LTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGG--PSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFN--ALGLSNRTLLL*QVDIQSDRRGAHHSGLT 688
            L L+L +L+ G     QL   FY+  C+N+   V  VV  A  K++ +  +++RL+FHDCF NGCD S+LLD ++S   EK A+ N  S RG+EVID+IKSAVEK C  VVSCADI+A+  RD V +  G    +++  GR D + +  SA    +P+P   + +  ++F+   L L++  LLL          G H  G+T
Sbjct:   11 LILSLALLSFGHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSNS---EKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKIS--SALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLL----------GGHTIGVT 196          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.091e-30
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 2
Query:   80 FFKFFLTLALLVLAMGSSTNA--------QLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNT--SSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL 634
            FF  FLT  +L+  +  +T+         +LS ++Y+  C  L   V SV      +      + +RLFFHDCFV GCDGS+L++    S    E+ A  N+     GF+ I   K+ VE  CP +VSC+DILAI ARD + + GGP +QVK GR D + ++       IP   S ++QLI  F + GL+   L++
Sbjct:   12 FFFLFLTSTILISPVQPTTSKPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVV 207          

HSP 2 Score: 28.4906 bits (62), Expect = 7.091e-30
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            ++LV L+G HTIG A C +F
Sbjct:  203 EELVVLSGSHTIGFAHCKNF 222          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.568e-29
Identity = 69/177 (38.98%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  101 LALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L  L   +  S  AQL T FY+ +C      V SVV +    +  + A+ LR+ FHDCFV GCD S+L+D       EK+   N  S RG+E+ID  K  +E ACP  VSCADI+ +  RDSV + GGP + V  GRRD   ++ +  N  +P PT  ++  I  F A G++   ++
Sbjct:    7 LFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVN--LPGPTIPVSASIQLFAAQGMNTNDMV 180          

HSP 2 Score: 24.2534 bits (51), Expect = 1.568e-29
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  622 DLVAL-AGGHTIGQARCTSFR 681
            D+V L  GGH++G A C+ F+
Sbjct:  178 DMVTLIGGGHSVGVAHCSLFQ 198          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.684e-28
Identity = 68/195 (34.87%), Postives = 104/195 (53.33%), Query Frame = 2
Query:   53 LASYQSMASFFKFFLTLALLVLA-MGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRN-SARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            +++ Q    F  F +   L V+A + S+  A L T++Y  TC +    V+  V +   ++    A  LRLFFHDCF+ GCD SVL+   S    E++ + N +     F+++  IK+A+E +CPGVVSCADILA   RD V ++GGP + VKLGR+D   +        +P     +  +   F   G S R ++
Sbjct:    1 MSNMQFSRGFNPFVILFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMV 195          

HSP 2 Score: 27.335 bits (59), Expect = 1.684e-28
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSF 678
            +++VAL+G HTIG + C  F
Sbjct:  192 REMVALSGAHTIGFSHCKEF 211          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.713e-28
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 2
Query:  146 LSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLS 616
            LS N+Y   C +    V + V+     ++ +G +LLRL FHDC V GCD SVLLD    + G +  +    + RGFE+ID+IKS +EK+CPG VSCADIL   +R + V LGGP W    GRRD++  S +     +P+   ++  L+  F + GL+
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLD----YEGTERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSK-HSYARDVEKVPSGRRDVTALLETFQSYGLN 202          

HSP 2 Score: 28.1054 bits (61), Expect = 3.713e-28
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARC 669
            DLV L+G HTIG+A C
Sbjct:  205 DLVVLSGAHTIGKASC 220          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER35_ARATH3.525e-3039.44Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER50_ARATH4.186e-3039.33Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER70_ARATH4.186e-3040.31Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER16_ARATH4.604e-3039.89Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER41_ARATH5.451e-3033.51Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER60_ARATH6.013e-3039.60Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER19_ARATH7.091e-3036.73Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER44_ARATH1.568e-2938.98Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER65_ARATH1.684e-2834.87Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER7_ARATH3.713e-2840.76Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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