FC921485

Overview
NameFC921485
Unique NameFC921485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_THET2 (CTP synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pyrG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            SS+G +L+A G RVT+IKIDPY+N DAGTM P+EH                 +YERFLD+ L+R NN+TTG++Y SVI KERRG+YL +TVQV+PHITD I++ I +VA
Sbjct:   32 SSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDMDLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVA 140          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_THEAC (CTP synthase OS=Thermoplasma acidophilum GN=pyrG PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            SSIG ILK  G++V+++KIDPY+N DAGTM+P++H                 NYERF++I L+RDNNITTGK+Y  VI KER GDYL KTVQ++PHITD I+  I  VA
Sbjct:   21 SSIGHILKDSGIKVSAVKIDPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFMNINLSRDNNITTGKVYLEVIQKERHGDYLGKTVQIIPHITDEIKRRIREVA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METPE (CTP synthase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pyrG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            MKY                A+SIG ILK  G RVT++KIDPYLN DAGTM+P +H                 NYERFLDI+L+  +NITTGK+Y+SVI+KERRGDYL  TVQ++PHITD I+  IE+ A
Sbjct:    1 MKYIIVTGGVMSGLGKGITAASIGRILKNRGYRVTAVKIDPYLNIDAGTMNPAQHGEVFVLGDGSEVDLDLGNYERFLDIELSGPHNITTGKVYRSVIEKERRGDYLGDTVQIIPHITDEIKCRIEQAA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METKA (CTP synthase OS=Methanopyrus kandleri GN=pyrG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERV 717
            +SIG IL+A  L VT++KIDPY+N DAGTM+PF+H                 +YERF+D+ L+  +NITTGKIYQ VI+KERRGDYL +TVQV+PHITD I+ WI  V
Sbjct:   21 ASIGRILRARELEVTAVKIDPYINVDAGTMNPFQHGEVFVTEDGVETDLDLGHYERFMDVTLSGAHNITTGKIYQRVIEKERRGDYLGETVQVIPHITDEIKSWIREV 128          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METHJ (CTP synthase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pyrG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28
Identity = 65/129 (50.39%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            MKY                A+SIG +LK  G +VT++KIDPYLN DAGTM+P +H                 NYERFLDI+L   +NITTGK+Y+ VIDKERRGDYL +TVQ++PHITD I+D I   A
Sbjct:    1 MKYIFVTGGVMSGLGKGITAASIGRLLKNRGYQVTAVKIDPYLNIDAGTMNPAQHGEVFVLHDGGEVDLDLGNYERFLDIELNSSHNITTGKVYRMVIDKERRGDYLGQTVQIIPHITDQIKDCIRSAA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_THEON (CTP synthase OS=Thermococcus onnurineus (strain NA1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++S+G+++KA G + T+IKIDPYLN DAGTM+P++H                 NYERFLD  LT D+NITTGKIY +VI+KERRGDYL  TVQV+PHIT+ I++ I  +A
Sbjct:   21 SASLGMLMKARGFKTTNIKIDPYLNYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLTFDHNITTGKIYSAVIEKERRGDYLGATVQVIPHITNEIKERIREIA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METBF (CTP synthase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            +SIG  LK  G +VT+IKIDPY+N DAGTMSP++H                 NYERFLD +LTRD+N+TTGKIY  VI KERRGDYL KTVQ++PH+T+ I+  I +VA
Sbjct:   21 ASIGRNLKDKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLKDGGEVDLDLGNYERFLDTELTRDHNLTTGKIYLEVISKERRGDYLGKTVQIIPHVTNEIKSRIRKVA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METB6 (CTP synthase OS=Methanoregula boonei (strain 6A8) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 64/129 (49.61%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            MKY                A+S+G ILK  G RVT++KIDPYLN DAGTM+P +H                 NYERFLDI+LT  +NITTGK+Y++VI+KERRGD+L +TVQ++PHITD I+  I + A
Sbjct:    1 MKYIFVTGGVMSGLGKGITAASVGRILKNRGYRVTAVKIDPYLNIDAGTMNPAQHGEVFVLKDGGEVDLDLGNYERFLDIELTSSHNITTGKVYRTVIEKERRGDFLGETVQIIPHITDQIKTCIRQAA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_VEREI (CTP synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++S+  IL++ GL+VT IK+DPY+N D GTMSPF+H                 +YERF++ ++ R NN TTGKIYQSV++KERRGDYL KTVQV+PH+T+ IQ++I+R A
Sbjct:   21 SASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIETRMNRANNFTTGKIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEFIQRGA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG1_CRIGR (CTP synthase 1 (Fragment) OS=Cricetulus griseus GN=CTPS PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28
Identity = 59/93 (63.44%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  451 DPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            DPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQ VI+KER+GDYL KTV VVPHITDAIQ W+ R A+IP
Sbjct:    1 DPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVHVVPHITDAIQRWVMRQALIP 93          
The following BLAST results are available for this feature:
BLAST of FC921485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_THET21.256e-2855.96CTP synthase OS=Thermus thermophilus (strain HB27 ... [more]
PYRG_THEAC1.256e-2855.96CTP synthase OS=Thermoplasma acidophilum GN=pyrG P... [more]
PYRG_METPE1.256e-2851.94CTP synthase OS=Methanosphaerula palustris (strain... [more]
PYRG_METKA1.256e-2856.48CTP synthase OS=Methanopyrus kandleri GN=pyrG PE=3... [more]
PYRG_METHJ1.640e-2850.39CTP synthase OS=Methanospirillum hungatei (strain ... [more]
PYRG_THEON2.142e-2854.55CTP synthase OS=Thermococcus onnurineus (strain NA... [more]
PYRG_METBF2.142e-2856.88CTP synthase OS=Methanosarcina barkeri (strain Fus... [more]
PYRG_METB62.142e-2849.61CTP synthase OS=Methanoregula boonei (strain 6A8) ... [more]
PYRG_VEREI2.798e-2852.73CTP synthase OS=Verminephrobacter eiseniae (strain... [more]
PYRG1_CRIGR4.772e-2863.44CTP synthase 1 (Fragment) OS=Cricetulus griseus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32105E04EF RVDevelopN Citrus clementina cDNA clone C32105E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921485 ID=FC921485; Name=FC921485; organism=Citrus clementina; type=EST; length=730bp
GAAAGCAAAGCAGACACGAAAAGATTTGGTGGGTGTATGCGGAATTGTAG
AGTCTCTCTTTTGTTATCTATTTTTGCTTTTTGGGTTTTTGTTTCACATT
ACAGCATTGAGATTACAAAGGAAAAAGAAAAATCTTTCTTCTTAGTCGAA
GAGAAAAGAGCGTGTAGTCACAAACAAGATAAACATAGACATAGAGATAA
ACACAGAACAGAAGCAGAGAGAGAGAGAGGGGCGGGAAGGCAGGCAGGCA
GGCAGGCAAAAGCAAATTATTAAACTTTGTAAAGACCGTCATTGTTAACA
AGTGAGTGAGTGAGTGAAGAGTCATAATCAAATATGAAGTACGTTTTGGT
GACTGGTGGCGTTGTTAGTGGACTGGGTAAAGGCGTCACTGCCAGTAGCA
TCGGTGTTATTCTTAAAGCATGTGGTCTCCGTGTTACTTCTATCAAGATT
GATCCTTACTTGAACACTGATGCCGGAACAATGTCCCCTTTTGAGCATGG
AGAGGTTTTTGTCTTAGACGATGGTGGTGAGGTGGACCTAGATCTTGGTA
ACTACGAGCGGTTTCTAGACATCAAGTTAACCCGTGACAACAATATAACG
ACTGGAAAAATATATCAGTCTGTTATTGACAAGGAGAGAAGGGGAGATTA
TCTTNGGAAAACTGTCCAGGTTGTTCCACACATTACAGATGCTATTCAAG
ACTGGATAGAACGTGTAGCAATGATTCCAG
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