FC921485

Overview
NameFC921485
Unique NameFC921485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_THEGJ (CTP synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++S+G+++KA G R T+IKIDPYLN DAGTM+P++H                 NYERFLD  L+ D+NITTGK+Y +VI+KER+G+YL  TVQV+PHIT+ I++ I R+A
Sbjct:   21 SASLGMLMKARGFRTTNIKIDPYLNYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLSFDHNITTGKVYSAVIEKERKGEYLGATVQVIPHITNEIKERIRRIA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_PYRKO (CTP synthase OS=Pyrococcus kodakaraensis GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++SIG++ KA G R T+IKIDPYLN DAGTM+P++H                 NYERFLD  L+ D+NITTGK+Y +VI+KER+G+YL  TVQV+PHIT+ I++ I R+A
Sbjct:   21 SASIGMLFKARGFRTTNIKIDPYLNYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLSFDHNITTGKVYSAVIEKERKGEYLGATVQVIPHITNEIKERIRRIA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_PYRFU (CTP synthase OS=Pyrococcus furiosus GN=pyrG PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++SIG+++KA G + T+IKIDPY+N DAGTM+P++H                 NYERFLD +LT D+NITTGK+Y +VI+KERRG+YL  TVQV+PHITD I+  I  +A
Sbjct:   21 SASIGLLMKARGYKTTNIKIDPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTELTFDHNITTGKVYSTVIEKERRGEYLGATVQVIPHITDEIKRRIREIA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_PYRAB (CTP synthase OS=Pyrococcus abyssi GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28
Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++SIG+++KA G + T+IKIDPY+N DAGTM+P++H                 NYERFLD  LT D+NITTGK+Y +VI+KERRG+YL  TVQV+PHITD I+  I  +A
Sbjct:   21 SASIGLLMKARGYKTTNIKIDPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLTFDHNITTGKVYSTVIEKERRGEYLGATVQVIPHITDEIKRRIREIA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_PICTO (CTP synthase OS=Picrophilus torridus GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            SS+  +LK  G +VT+IKIDPY+N DAGTM+P++H                 NYERFLD  LT +NNITTGKIY+SVI++ER GDYL KTVQ++PHIT+ I++ I+R +
Sbjct:   21 SSLSYLLKNSGFKVTNIKIDPYINYDAGTMNPYQHGEVFVLDDGSEVDLDLGNYERFLDTDLTGNNNITTGKIYKSVIERERHGDYLGKTVQIIPHITNEIKERIKRAS 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_ACIC5 (CTP synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=pyrG PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            A+SIG +L+A GLRV  +K DPYLN D GTMSPF+H                 +YERF   +LTRDNN+TTG+IY+ +I KERRGDYL KTVQV+PH+T+ I++ + +VA
Sbjct:   22 AASIGCLLEARGLRVNLMKFDPYLNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFTHARLTRDNNLTTGRIYEQIITKERRGDYLGKTVQVIPHVTNEIKNAMRKVA 131          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_THEVO (CTP synthase OS=Thermoplasma volcanium GN=pyrG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 1
Query:  394 SSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            SSIG ILK  G +V+S+KIDPY+N DAGTM+P++H                 NYERF+DI L+  NNITTGK+Y  VI+KER GDYL KTVQ++PHITD I+  I  VA
Sbjct:   21 SSIGHILKDSGFKVSSVKIDPYINYDAGTMNPYQHGEVFVLDDGSEVDLDLGNYERFMDINLSWKNNITTGKVYLEVIEKERHGDYLGKTVQIIPHITDEIKRRIRDVA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_METLZ (CTP synthase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pyrG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27
Identity = 66/129 (51.16%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            MKY                A+SIG IL   G  VTS+KIDPYLN DAG M+P +H                 NYERFLDI+LT D+N+TTGKIY SVI KER GDYL  TVQ++PHITD I+D I+  A
Sbjct:    1 MKYVVVTGGVMSGLGKGITAASIGRILINRGYHVTSVKIDPYLNIDAGLMNPAQHGEVFVLKDGGEADLDLGNYERFLDIELTSDHNLTTGKIYSSVISKERHGDYLGATVQIIPHITDEIKDRIKHAA 129          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_DELAS (CTP synthase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27
Identity = 56/110 (50.91%), Postives = 80/110 (72.73%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVA 720
            ++S+  IL++ GL+VT IK+DPY+N D GTMSPF+H                 +YERF++ ++ + NN TTG+IYQSV++KERRGDYL KTVQV+PH+T+ IQ++I+R A
Sbjct:   21 SASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIETRMKQSNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEYIKRGA 130          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG_ACIAC (CTP synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27
Identity = 56/112 (50.00%), Postives = 81/112 (72.32%), Query Frame = 1
Query:  391 ASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMI 726
            ++S+  IL++ GL+VT IK+DPY+N D GTMSPF+H                 +YERF++ ++ + NN TTG+IYQSV++KERRGDYL KTVQV+PH+T+ IQ++++R A I
Sbjct:   21 SASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIETRMKKTNNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEYVKRGAGI 132          
The following BLAST results are available for this feature:
BLAST of FC921485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_THEGJ6.233e-2852.73CTP synthase OS=Thermococcus gammatolerans (strain... [more]
PYRG_PYRKO6.233e-2853.64CTP synthase OS=Pyrococcus kodakaraensis GN=pyrG P... [more]
PYRG_PYRFU6.233e-2853.64CTP synthase OS=Pyrococcus furiosus GN=pyrG PE=3 S... [more]
PYRG_PYRAB8.140e-2853.64CTP synthase OS=Pyrococcus abyssi GN=pyrG PE=3 SV=... [more]
PYRG_PICTO8.140e-2854.13CTP synthase OS=Picrophilus torridus GN=pyrG PE=3 ... [more]
PYRG_ACIC51.063e-2753.64CTP synthase OS=Acidobacterium capsulatum (strain ... [more]
PYRG_THEVO1.389e-2755.96CTP synthase OS=Thermoplasma volcanium GN=pyrG PE=... [more]
PYRG_METLZ1.389e-2751.16CTP synthase OS=Methanocorpusculum labreanum (stra... [more]
PYRG_DELAS1.389e-2750.91CTP synthase OS=Delftia acidovorans (strain DSM 14... [more]
PYRG_ACIAC1.389e-2750.00CTP synthase OS=Acidovorax avenae subsp. citrulli ... [more]

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Properties
Property NameValue
Genbank descriptionC32105E04EF RVDevelopN Citrus clementina cDNA clone C32105E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921485 ID=FC921485; Name=FC921485; organism=Citrus clementina; type=EST; length=730bp
GAAAGCAAAGCAGACACGAAAAGATTTGGTGGGTGTATGCGGAATTGTAG
AGTCTCTCTTTTGTTATCTATTTTTGCTTTTTGGGTTTTTGTTTCACATT
ACAGCATTGAGATTACAAAGGAAAAAGAAAAATCTTTCTTCTTAGTCGAA
GAGAAAAGAGCGTGTAGTCACAAACAAGATAAACATAGACATAGAGATAA
ACACAGAACAGAAGCAGAGAGAGAGAGAGGGGCGGGAAGGCAGGCAGGCA
GGCAGGCAAAAGCAAATTATTAAACTTTGTAAAGACCGTCATTGTTAACA
AGTGAGTGAGTGAGTGAAGAGTCATAATCAAATATGAAGTACGTTTTGGT
GACTGGTGGCGTTGTTAGTGGACTGGGTAAAGGCGTCACTGCCAGTAGCA
TCGGTGTTATTCTTAAAGCATGTGGTCTCCGTGTTACTTCTATCAAGATT
GATCCTTACTTGAACACTGATGCCGGAACAATGTCCCCTTTTGAGCATGG
AGAGGTTTTTGTCTTAGACGATGGTGGTGAGGTGGACCTAGATCTTGGTA
ACTACGAGCGGTTTCTAGACATCAAGTTAACCCGTGACAACAATATAACG
ACTGGAAAAATATATCAGTCTGTTATTGACAAGGAGAGAAGGGGAGATTA
TCTTNGGAAAACTGTCCAGGTTGTTCCACACATTACAGATGCTATTCAAG
ACTGGATAGAACGTGTAGCAATGATTCCAG
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