FC921486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_ARCFU (Probable spermidine synthase OS=Archaeoglobus fulgidus GN=speE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 47/117 (40.17%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 WF E + G ++KV+K L++ + Q V ++++ + GK+L++DG IQLTE DE Y EM+ H+P+ S NP+KV VI LREV +H +VE+ + +ID+ V+D+S+ F Sbjct: 3 WFFEY---YDGCGLAIKVKKKLYEAEG-VQKVEIYETESMGKMLVIDGKIQLTELDEPFYHEMLVHVPMLSHENPRKVAVIGGGDGGALREVLKH-NVERAVLVDIDRNVIDLSRKF 114
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_THET8 (Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=speE PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 358 PGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSK 675 P E ++E+++ GK+ +Q+ +F+S +GKVLILD +Q TERDE Y E + H + + P PK+VL++ LREV +H +VEK + +ID +V+V+K Sbjct: 13 PYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAK 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_THET2 (Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=speE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 358 PGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSK 675 P E ++E+++ GK+ +Q+ +F+S +GKVLILD +Q TERDE Y E + H + + P PK+VL++ LREV +H +VEK + +ID +V+V+K Sbjct: 13 PYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAK 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SULTO (Probable spermidine synthase OS=Sulfolobus tokodaii GN=speE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 W I P E H + K++ + K+ YQ + + + +GK LILDG IQ T DE Y E + H L SI NP+K+L++ LREV +H +++ + + +ID +V+D +K + Sbjct: 4 WHWHIEWQTPYEFHGHAITKVIAEEKTPYQRALLVELARFGKALILDGKIQSTITDEFIYHEALVHPLLLSINNPEKILILGGGEGATLREVLKHKTIKNVTMVDIDPVVIDFAKKY 120
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_NITOC (Spermidine synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=speE PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1 Query: 328 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 GWF+E+ G A SL + + L + YQ + ++Q+ T+G+++++DG I L+ RD Y EM+ H L + P+P++VL+I LREV +H VEK+ EID+ V +++ + Sbjct: 7 GWFTEVCKEG-GLAFSLAIREKLHAETTPYQYIEIYQTETFGRLMVIDGFIMLSGRDNFFYHEMMAHPVLFTHPHPQRVLIIGGGDCGTLREVLKHDVVEKVQQVEIDERVTRLAEKY 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_PYRHO (Probable spermidine synthase OS=Pyrococcus horikoshii GN=speE PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 36/107 (33.64%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 361 GEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 G + KV++ + + +S+YQ + V+++ +GK+L +DG +QL E +Y E + H + + PNP++VL+I +REV +H VE++ + EIDK V+++S + Sbjct: 13 GYGVAFKVKRKILEEQSEYQKIEVYETEGFGKLLAIDGTVQLVTEGEKSYHEPLVHPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMVEIDKKVIEISAKY 119
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_HALHL (Spermidine synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=speE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 328 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSK-HF 681 GWF+E G A SL +++ + + +S+YQ++ V+++ +G++L+LDG + LTERDE Y EM+ H L + P++V ++ +LREV RH VE E+D+ V V++ HF Sbjct: 4 GWFTEAVED-EGVAFSLAIDERVHEEQSEYQHIEVYRTRRWGRLLVLDGCVMLTERDEFLYHEMMAHPALFAHREPRRVAIVGGGDCGILREVLRHPGVEHTLQVELDERVTRVAETHF 121
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SULIY (Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=speE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 328 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPN-PKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 GW + P E H +EK+ + K+ YQ+VT+ + + +GK LI+DG +Q T DE Y E++ H L S+P PK VL++ LREV ++ SVEK + +ID+ V++ +K + Sbjct: 3 GWHWLLEWQTPYEFHGHLIEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKY 121
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SULIN (Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=speE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 328 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPN-PKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 GW + P E H +EK+ + K+ YQ+VT+ + + +GK LI+DG +Q T DE Y E++ H L S+P PK VL++ LREV ++ SVEK + +ID+ V++ +K + Sbjct: 3 GWHWLLEWQTPYEFHGHLIEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKY 121
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SULIM (Probable spermidine synthase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=speE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 328 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPN-PKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 GW + P E H +EK+ + K+ YQ+VT+ + + +GK LI+DG +Q T DE Y E++ H L S+P PK VL++ LREV ++ SVEK + +ID+ V++ +K + Sbjct: 3 GWHWLLEWQTPYEFHGHLIEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKY 121 The following BLAST results are available for this feature:
BLAST of FC921486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921486 ID=FC921486; Name=FC921486; organism=Citrus clementina; type=EST; length=690bpback to top |