FC921486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XANOM (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=speE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 361 GEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK+V++I LREV +H VE C+ID+ V +S+ + Sbjct: 16 GSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKY 122
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_ALHEH (Spermidine synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 37/117 (31.62%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 WF+E+ G A SL+V + L + ++ +Q++ V+++ +G++L++DG + LT RD Y EM++H L + P+P++V +I +LREV +H +E + +ID V ++ + Sbjct: 7 WFTEVLEE-EGMAFSLRVREKLHEERTAFQHIEVYETEAWGRLLVIDGCVMLTSRDNFVYHEMMSHPALFTHPDPRRVAIIGGGDCGMLREVLKHPGIESVVQVDIDAGVTRAAERY 122
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_PYRAR (Probable spermidine synthase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=speE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 322 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 +PG + P+ + +KV ++L +S YQ + V ++ YG+ LILD IQ + DE Y E + H + + P P+ VL++ LREV +H +VEK + +ID VV++SK F Sbjct: 4 VPGPIVLVEPLSGNTSLLIKVNEVLAVRRSRYQEIMVVETEDYGRALILDDYIQSSYYDEAFYHESLVHPAMVTHPAPRDVLILGGGEGATLREVLKHPTVEKAVMVDIDGDVVELSKRF 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_METCA (Spermidine synthase OS=Methylococcus capsulatus GN=speE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 40/117 (34.19%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 WF+E P G A SLK+ L + ++ +Q + ++ + ++GK++++DG +++RD Y EM+TH L + P PK V +I LREV +HS VEK +ID+ V +++ + Sbjct: 7 WFTESYPD-NGSALSLKIRAKLHEEQTPFQRIEIYDTESFGKLMVIDGCTMVSDRDNFLYHEMMTHPVLYTHPAPKTVWIIGGGDCGSLREVLKHSEVEKAVQIDIDERVTRLAERY 122
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFT (Spermidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=speE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 41/118 (34.75%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVS-KHF 681 WF+E G A +V L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++I LREV +H +E++ C+ID+ V ++ KHF Sbjct: 7 WFTEHFQT-TGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHF 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFM (Spermidine synthase OS=Xylella fastidiosa (strain M12) GN=speE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 41/118 (34.75%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVS-KHF 681 WF+E G A +V L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++I LREV +H +E++ C+ID+ V ++ KHF Sbjct: 7 WFTEHFQA-TGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFIYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHF 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XYLF2 (Spermidine synthase OS=Xylella fastidiosa (strain M23) GN=speE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 41/118 (34.75%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVS-KHF 681 WF+E G A +V L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++I LREV +H +E++ C+ID+ V ++ KHF Sbjct: 7 WFTEHFQT-TGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHF 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFA (Spermidine synthase OS=Xylella fastidiosa GN=speE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVS-KHF 681 WF+E G A ++ L + +S +Q + ++ S+ +GK++++DG + LT RD Y EMI+H L + PK V++I LREV +H +E++ C+ID+ V ++ KHF Sbjct: 7 WFTEHFQA-TGSAIGFRITGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHF 123
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XANCP (Spermidine synthase OS=Xanthomonas campestris pv. campestris GN=speE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 361 GEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 G A ++ L + +S +Q + ++Q++ +GK++I+DG + LT RD Y EMI+H L + PK+V++I LREV +H VE C+ID+ V +S+ + Sbjct: 16 GSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKY 122
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_XANCB (Spermidine synthase OS=Xanthomonas campestris pv. campestris (strain B100) GN=speE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 361 GEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 G A ++ L + +S +Q + ++Q++ +GK++I+DG + LT RD Y EMI+H L + PK+V++I LREV +H VE C+ID+ V +S+ + Sbjct: 16 GSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKY 122 The following BLAST results are available for this feature:
BLAST of FC921486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921486 ID=FC921486; Name=FC921486; organism=Citrus clementina; type=EST; length=690bpback to top |